fetch‐kaiju‐db

Fetch Kaiju database.

Inputs

No inputs are needed for this action.

Parameters

• database-type (Str): Type of database to be downloaded. For more information on available types please see the list on Kaiju's web server: https://kaiju.binf.ku.dk/server.

Outputs

• database (KaijuDB): Kaiju database.

Citation

@article{key0,
 author = {Menzel, Peter and Ng, Kim Lee and Krogh, Anders},
 doi = {10.1038/ncomms11257},
 issn = {2041-1723},
 journal = {Nature Communications},
 keywords = {Classification and taxonomy,Metagenomics},
 month = {April},
 number = {1},
 pages = {11257},
 publisher = {Nature Publishing Group},
 title = {Fast and Sensitive Taxonomic Classification for Metagenomics with Kaiju},
 volume = {7},
 year = {2016}
}