collate‐sample‐data‐mags

Collate a collection of SampleData[MAGs] artifacts into a single one.

For the full description of the action's inputs, outputs, and parameters run qiime moshpit collate‐sample‐data‐mags --help in the terminal.

Inputs

• mags (List[SampleData[MAGs]]): Collection of MAGs. They all must be contained in a folder with nothing but SampleData[MAGs] artifacts.

Outputs

• partitioned_mags (SampleData[MAGs]): Collated MAGs.

Example Use

qiime moshpit collate‐sample‐data‐mags \
   --i-mags mags \ # Folder with SampleData[MAGs] artifacts inside
   --o-collated_mags collated_mags.qza \
   --verbose