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Pull requests: broadinstitute/warp

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Pull requests list

Np deprecate cemba
#1386 opened Oct 16, 2024 by nikellepetrillo Loading…
3 tasks
9
Np add testing for atac lib metrics
#1385 opened Oct 15, 2024 by nikellepetrillo Loading…
3 tasks
7
PD-2758: Start Slidetags WDL
#1377 opened Oct 2, 2024 by aawdeh Loading…
3 tasks
78
TSPS-239 get wdl running on 500k sample ref panel
#1373 opened Sep 13, 2024 by jsotobroad Loading…
3 tasks
1
Lk pd 2726
#1359 opened Aug 15, 2024 by ekiernan Loading…
51
Update tasks and tools table with Summary_PerCellOutput
#1356 opened Aug 7, 2024 by gsenior09 Loading…
3 tasks
5
[DRAFT] TSPS-183 Beagle imputation hg38 wdl and associated support wdls
#1333 opened Jul 15, 2024 by mmorgantaylor Loading…
3 tasks
10
Kp test framework pt1 pd 2645
#1300 opened Jun 18, 2024 by kevinpalis Loading…
3 tasks
21
Kp validate changelog gha pd 2563 DO NOT MERGE
#1271 opened Apr 24, 2024 by kevinpalis Loading…
3 tasks
2
Updating picard version in QC.wdl to avoid error with updated Platform Name (PL) in the SAM/BAM/CRAM file.
#1257 opened Apr 1, 2024 by jiveshs98 Loading…
2
Bump express from 4.18.2 to 4.19.2 in /website dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#1256 opened Mar 28, 2024 by dependabot bot Loading…
4
Bump webpack-dev-middleware from 5.3.3 to 5.3.4 in /website dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#1249 opened Mar 23, 2024 by dependabot bot Loading…
2
Bump follow-redirects from 1.14.9 to 1.15.6 in /website dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#1241 opened Mar 15, 2024 by dependabot bot Loading…
2
Update JointGenotyping.inputs.json
#1216 opened Feb 27, 2024 by ldgauthier Loading…
1 of 3 tasks
3
Remove fastqprocess and mergebam tasks when running star once DO NOT MERGE
#1195 opened Feb 2, 2024 by aawdeh Loading…
3 tasks
10
PD-2501 StarSolo on one machine DO NOT MERGE
#1194 opened Feb 2, 2024 by aawdeh Loading…
3 tasks
4
Bump jinja2 from 3.1.2 to 3.1.3 in /verification/test-wdls/scripts dependencies Pull requests that update a dependency file python Pull requests that update Python code
#1176 opened Jan 11, 2024 by dependabot bot Loading…
4
Update VCFComparator in verify tasks to handle ref block DP differences
#1118 opened Nov 6, 2023 by ldgauthier Loading…
3 tasks
5
Uncomment output paths in snM3C wdl
#1113 opened Nov 1, 2023 by aawdeh Loading…
3 tasks
1
Kp pytools to warptools pd 2186 DO NOT MERGE
#1026 opened Jun 26, 2023 by kevinpalis Loading…
3 tasks
21
Add examples using public gs links from the broad-references-private sources
#997 opened Jun 1, 2023 by mr-c Loading…
5
Moved whitelist parameters as input files
#962 opened Apr 12, 2023 by vsmalladi • Draft
3 tasks
7
Add in index file for azure
#961 opened Apr 11, 2023 by vsmalladi • Draft
3 tasks
4
Add option for requester pays into joint genotyper (import gvcf)
#846 opened Oct 23, 2022 by yfarjoun Loading…
5
ProTip! Exclude everything labeled bug with -label:bug.