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README.md

@@ -8,6 +8,6 @@ Email: [[email protected]](mailto:[email protected])
 # My Research Interests
 * Statistical Genetics and Genomics
 * Biological Network Analysis
-* Functional Genome/Annotation Analysis.
+* Functional Genome/Annotation Analysis
 * Bayesian Modeling
 * Machine Learning

_pages/publications.md

@@ -18,5 +18,15 @@ author_profile: true
 * Zhu, L., Yan, S., **<u>Cao, X.</u>**, Sha, Q. & Zhang, S.\* (2023+). Integrating external controls by regression calibration for genome-wide association study. *Will be submitted soon*
 
 ## \[2023\]
-* **<u>Cao, X.</u>**\#, Zhang, L.\#, Islam, M.K., Zhao, M., He, C., Zhang, K., Liu, S., Sha, Q.\* & Wei, H.\*, 2023. TGPred: efficient methods for predicting target genes of a transcription factor by integrating statistics, machine learning and optimization. *NAR Genomics and Bioinformatics*, 5(3), p.lqad083. [doi](https://doi.org/10.1093/nargab/lqad083)
-* 
+* **<u>Cao, X.</u>**\#, Zhang, L.\#, Islam, M.K., Zhao, M., He, C., Zhang, K., Liu, S., Sha, Q.\* & Wei, H.\*, (2023). TGPred: efficient methods for predicting target genes of a transcription factor by integrating statistics, machine learning and optimization. *NAR Genomics and Bioinformatics*, 5(3), p.lqad083. [doi](https://doi.org/10.1093/nargab/lqad083)
+* Wang, M., **<u>Cao, X.</u>**, Zhang, S. & Sha, Q.\* (2023). A clustering linear combination method for multiple phenotype association studies based on GWAS summary statistics. *Scientific Reports*. 13(1), p.3389. [doi](https://www.nature.com/articles/s41598-023-30415-3)
+* Xie, H., **<u>Cao, X.</u>**, Zhang, S. & Sha, Q.\* (2023). Joint analysis of multiple phenotypes for extremely unbalanced case-control association studies. *Genetic Epidemiology*. 47(2), pp.185-197. [doi](https://doi.org/10.1002/gepi.22513)
+
+## \[2022\]
+* **<u>Cao, X.</u>**, Liang, X., Zhang, S. & Sha, Q.\* (2022). Gene selection by incorporating genetic networks into case-control association studies. *European Journal of Human Genetics*. [doi](https://www.nature.com/articles/s41431-022-01264-x)
+* **<u>Cao, X.</u>**, Wang, X., Zhang, S. & Sha, Q.\* (2022). Gene-based association tests using GWAS summary statistics and incorporating eQTL. *Scientific Reports*. 12(1):3553. [doi](https://www.nature.com/articles/s41598-022-07465-0)
+* Boby, N.\#, **<u>Cao, X.</u>**\#, Williams, K., Gadila, S.K.G., Shroyer, M.N., Didier, P.J., Srivastav, S.K., Das, A., Baker, K., Sha, Q. & Pahar, B.\* (2022). Simian Immunodeficiency Virus Infection Mediated Changes in Jejunum and Peripheral SARS-CoV-2 Receptor ACE2 and Associated Proteins or Genes in Rhesus Macaques. *Frontiers in Immunology*. 13, p.835686. [doi](https://www.frontiersin.org/articles/10.3389/fimmu.2022.835686/full)
+* Liang, X., **<u>Cao, X.</u>**, Sha, Q. & Zhang, S.\* (2022). HCLC-FC: a Novel Statistical Method for Phenome-Wide Association Studies. *PLOS ONE*. 17(11): e0276646. [doi](https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0276646)
+
+## \[2021\]
+* Boby, N.\#, **<u>Cao, X.</u>**\#, Ransom, A., Pace, B.T., Mabee, C., Shroyer, M.N., Das, A., Didier, P.J., Srivastav, S.K., Porter, E., Sha, Q. & Pahar, B.\* (2021) Identification, Characterization, and Transcriptional Reprogramming of Epithelial Stem Cells and Intestinal Enteroids in Simian Immunodeficiency Virus Infected Rhesus Macaques. *Frontiers in Immunology*. 12, p.769990. [doi](https://www.frontiersin.org/articles/10.3389/fimmu.2021.769990/full)