MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
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Updated
Jun 14, 2024 - Kotlin
MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluation (OASis) and an interface for computer-assisted antibody sequence design.
Post-analysis of immune repertoire sequencing data
📚 Tools and databases for analyzing HLA and VDJ genes.
HTS-compatible wrapper for IgBlast V-(D)-J mapping tool
A RepSeq processing swiss-knife
Sapiens is a human antibody language model based on BERT.
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R package to BLAST peptide sequences against each other and identify the minimal overlap of aligning regions.
Official repository for discrete Walk-Jump Sampling (dWJS)
KA-Search: Rapid and exhaustive sequence identity search of known antibodies
Material to run the HADDOCK antibody-antigen modelling protocol
My macOS dev setup: zsh configuration and a collection of bash scripts.
Tool for rapid clustering of antibody models by the structure of their CDRs.
Official repository for discrete Walk-Jump Sampling (dWJS)
Improved antibody structure-based design using inverse folding
A utility first dev tooling repo with dotbot, zsh, antibody, defaults, pkgsrc, plist, fonts, git-extras, git-quick-stats, atom, pip, npm, cargo, go, karabiner, carpalx full optimization.
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