Skip to content
@haddocking

HADDOCK

Computational Structural Biology Group @ Utrecht University

Pinned

  1. haddock3 haddock3 Public

    Official repo of the modular BioExcel version of HADDOCK

    Python 82 25

  2. arctic3d arctic3d Public

    Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information

    Python 25 5

  3. pdb-tools pdb-tools Public

    A dependency-free cross-platform swiss army knife for PDB files.

    Python 365 112

  4. prodigy prodigy Public

    Predict the binding affinity of protein-protein complexes from structural data

    Python 91 23

  5. fcc fcc Public

    Fraction of Common Contacts Clustering Algorithm for Protein Structures

    Python 23 16

  6. haddock-runner haddock-runner Public

    Run large scale HADDOCK simulations using multiple input molecules in different scenarios

    Go 2 1

Repositories

Showing 10 of 58 repositories
  • haddock3 Public

    Official repo of the modular BioExcel version of HADDOCK

    Python 82 Apache-2.0 25 18 9 Updated May 28, 2024
  • DeepRank-GNN-esm Public Forked from DeepRank/DeepRank-GNN-esm

    Graph Network for protein-protein interface including language model features

    Python 4 Apache-2.0 6 0 0 Updated May 28, 2024
  • cport Public

    CPORT is a Consensus Prediction Of interface Residues in Transient complexes used to predict protein-protein interface residues.

    Python 2 Apache-2.0 3 5 2 Updated May 27, 2024
  • arctic3d Public

    Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information

    Python 25 Apache-2.0 5 5 4 Updated May 27, 2024
  • haddocking.github.io Public

    Webpage of the Bonvinlab @ Utrecht University and HADDOCK software

    HTML 13 MIT 21 3 4 Updated May 21, 2024
  • proABC-2 Public

    Deep learning framework to predict antibody paratope residues

    Python 0 Apache-2.0 0 0 0 Updated May 16, 2024
  • haddock-runner Public

    Run large scale HADDOCK simulations using multiple input molecules in different scenarios

    Go 2 Apache-2.0 1 0 0 Updated May 13, 2024
  • prodigy-cryst Public

    Contacts-based classifier of biological and crystallographic interfaces

    Python 7 Apache-2.0 4 0 0 Updated Apr 30, 2024
  • pdb-tools Public

    A dependency-free cross-platform swiss army knife for PDB files.

    Python 365 Apache-2.0 112 13 6 Updated Apr 28, 2024
  • prodigy-lig Public

    Prediction of Protein-Small molecule binding affinities

    Python 12 Apache-2.0 4 1 0 Updated Apr 26, 2024

Top languages

Loading…

Most used topics

Loading…