antibody
Here are 81 public repositories matching this topic...
MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
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May 21, 2024 - Kotlin
📚 Tools and databases for analyzing HLA and VDJ genes.
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May 9, 2024
BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluation (OASis) and an interface for computer-assisted antibody sequence design.
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Jan 3, 2024 - Python
Post-analysis of immune repertoire sequencing data
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Mar 29, 2024 - Groovy
HTS-compatible wrapper for IgBlast V-(D)-J mapping tool
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Mar 2, 2018 - Groovy
Official repository for discrete Walk-Jump Sampling (dWJS)
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Dec 17, 2023 - Python
🦠 Regularly updated list of publicly available datasets with single-cell (scRNAseq) and T-cell/antibody immune repertoire (AIRR / RepSeq / immunosequencing) data of COVID-19 patients with SARS-CoV-2.
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May 21, 2020
A RepSeq processing swiss-knife
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Mar 29, 2024 - Groovy
Sapiens is a human antibody language model based on BERT.
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Apr 19, 2023 - Jupyter Notebook
Official repository for discrete Walk-Jump Sampling (dWJS)
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Mar 15, 2024 - Python
Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
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Jun 10, 2023 - Jupyter Notebook
Improved antibody structure-based design using inverse folding
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May 21, 2024 - Python
Python package for analysis of antibody heavy and light chains
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Aug 16, 2020 - Python
Material to run the HADDOCK antibody-antigen modelling protocol
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Jan 2, 2024 - Python
Inference code for BALM
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Sep 12, 2023 - Python
Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling
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Apr 26, 2024 - C#
PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)
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Aug 20, 2023 - Python
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