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Circall v1.0.0

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@datngu datngu released this 08 Jul 10:49
· 9 commits to master since this release

06 July 2022: version 1.0.0

  • Re-organization of the software package => user-friendly version with Docker.
  • Speed up file reading in R with data.table package.
  • Fix bugs in hg38 annotation.
  • Output format with an additional column: junction_FPM - junction fragment per million .i.e, junction_fragment_count normalized by million fragment unit.
  • Default option "-td" changed to FALSE

NOTE:

  • Tutorial has been changed for Docker running tutorial in this version.
  • An old version can be found in the sub-directory Circall_v0.1.0.