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BUG: unrecognised file when downloading Busco db #215

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VinzentRisch opened this issue Oct 24, 2024 · 0 comments
Open

BUG: unrecognised file when downloading Busco db #215

VinzentRisch opened this issue Oct 24, 2024 · 0 comments
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@VinzentRisch
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VinzentRisch commented Oct 24, 2024

Describe the bug
When downloading the busco db with prok, virus and euk:

qiime moshpit fetch-busco-db --output-dirout --p-prok True --p-virus True --p-euk True --verbose

This error pops up:

Plugin error from moshpit:

  Unrecognized file (/var/folders/nj/rfpdzc_90zl3555cttz236_w0000gp/T/q2-BuscoDatabaseDirFmt-cylxqv1s/busco_downloads/information/lineages_list.2021-12-14.txt) for BuscoDatabaseDirFmt.

I checked in the format and this file is not listed. i do not know what happened maybe this file was added recently with a new update.
I ran the command with just --p-prok True or with just -p-virus True and both did not lead to the error.
When running it with only euk:

qiime moshpit fetch-busco-db --output-dirout --p-euk True --verbose

This error pops up:

Plugin error from moshpit:

  Unrecognized file (/var/folders/nj/rfpdzc_90zl3555cttz236_w0000gp/T/q2-BuscoDatabaseDirFmt-tctblui_/busco_downloads/lineages/fungi_odb10/missing_in_parasitic.txt) for BuscoDatabaseDirFmt.

Please complete the following information:

  • OS: macOS
  • QIIME 2 version: moshpit 2024.10.0.dev0+28.g10bb850
@VinzentRisch VinzentRisch added the bug Something isn't working label Oct 24, 2024
@misialq misialq changed the title BUG: Unrecognised file when downloading Busco db BUG: unrecognised file when downloading Busco db Nov 1, 2024
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