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fix: Replace undefined original_cigar with input cigar in adjust_ciga…
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…r_string
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ekg committed Dec 12, 2024
1 parent 4aa7383 commit de664fb
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion src/align/include/computeAlignments.hpp
Original file line number Diff line number Diff line change
Expand Up @@ -414,7 +414,7 @@ std::string adjust_cigar_string(const std::string& cigar,
}
}
// Early return if we can't swap to prevent further processing
return original_cigar;
return cigar;
}

std::swap(ops[ops.size() - 2], ops.back());
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