Release 6.0.0-rc.1
#110
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Release 6.0.0-rc.1
#110
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added 9 commits
July 25, 2023 14:43
yashpatel6
approved these changes
Aug 2, 2023
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Looks good! One small comment
Anything else to add @tyamaguchi-ucla ?
added 2 commits
August 2, 2023 10:24
tyamaguchi-ucla
approved these changes
Aug 2, 2023
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Description
PR to release
v6.0.0-rc.1.Breaking changes,
Closes #107
Testing Results from PR #106
DNA A-mini TWGSAMIN000001-T003-S03-F
DNA real sample ILHNLNEV000009-T002-L01-F
Checklist
I have read the code review guidelines and the code review best practice on GitHub check-list.
I have reviewed the Nextflow pipeline standards.
The name of the branch is meaningful and well formatted following the standards, using [AD_username (or 5 letters of AD if AD is too long)]-[brief_description_of_branch].
I have set up or verified the branch protection rule following the [github standards](https://confluence.mednet.ucla.edu/pages/viewpage.action?spaceKey=BOUTROSLAB&title=GitHub+Standards#GitHubStanda
rds-Branchprotectionrule) before opening this pull request.
I have added my name to the contributors listings in the
manifestblock in thenextflow.configas part of this pull request, am listedalready, or do not wish to be listed. (This acknowledgement is optional.)
I have added the changes included in this pull request to the
CHANGELOG.mdunder the next release version or unreleased, and updated the date.I have updated the version number in the
metadata.yamlandmanifestblock of thenextflow.configfile following semver, or the version number has already been updated. (Leave it unchecked if you are unsure about new version number and discuss it with the infrastructure team in this PR.)I have tested the pipeline on at least one A-mini sample with
algorithm = ['delly', 'manta']. The paths to the test config files and output directories are attached above.