SomaticSniper is a tool to identify somatic point mutations in whole genome sequencing data. It employs a Bayesian comparision of the genotype likelihoods in the tumor and normal samples. The UCLA-CDS's SomaticSniper image is located in the Boutros Lab Docker Hub repository.
The main page of SomaticSniper can be found here. The github page of SomaticSniper can be found here.
| Tool | Version |
|---|---|
| SomaticSniper | 1.0.5.0 |
- David E. Larson, et al., SomaticSniper: identification of somatic point mutations in whole genome sequencing data, Bioinformatics, Volume 28, Issue 3, 1 February 2012, Pages 311–317.
Author: Caden Bugh, Mao Tian
docker-SomaticSniper is licensed under the GNU General Public License version 2. See the file LICENSE for the terms of the GNU GPL license.
docker-SomaticSniper is used to detect somatic SNVs in sequencing data.
Copyright (C) 2021 University of California Los Angeles ("Boutros Lab") All rights reserved.
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.