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Jan 13, 2022 - HTML
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dge
Here are 12 public repositories matching this topic...
zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs
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May 15, 2023 - R
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Mar 23, 2021 - R
Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.
validation
ngs
sequencing
scrna-seq
umi
single-cell
fastq
high-throughput-sequencing
barcodes
10x
drop-seq
fastq-files
dge
umi-count
fastq-filterpair
digital-gene-expression
fastq-validation
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Mar 25, 2023 - C
Simple Snakemake RNA-Seq pipeline
python
rna-seq
snakemake
r
pandas
python3
bioconductor
salmon
miniconda
dge
miniconda3
dge-analysis
salmon-deseq2
rnaseq-pipeline
snakemake-pipeline
rnaseq-analysis
snakemake-rna-seq
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Mar 21, 2023 - Python
An Rpackage to identify cells membrane marker genes from bulkRNA sequencing data
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Jan 14, 2024 - R
R-shiny app for processing differential gene expression data
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Sep 4, 2021 - R
my_RNA_seq_pipelines
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Mar 19, 2024 - Jupyter Notebook
Jupyter notebooks for DGE results and ontology analysis and visualisation.
data-visualization
deseq2
transcriptomics
salmon
dge
salmon-deseq2
deseq2-analysis
ontology-analysis
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Feb 26, 2024 - Jupyter Notebook
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