Image-processing software for cryo-electron microscopy
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Updated
Jun 12, 2024 - C++
Image-processing software for cryo-electron microscopy
Computational Crystallography Toolbox
Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising with DNNs.
Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM)
A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.
High Throughput Electron Microscopy Image Processing Software
pytorch implementation of noise2noise for Cryo-EM image denoising
Self-supervised learning for isotropic cryoET reconstruction
A curated list of awesome computational cryo-EM methods.
Emap2sec+: Detecting Protein and DNA/RNA Structures in Cryo-EM Maps of Intermediate Resolution Using Deep Learning
Python library that enables scripting access to CryoSPARC, a cryo-EM software package.
register 3D point clouds using rotation, translation, and scale transformations.
Rigid body fitting of atomic strucures in cryo-electron microscopy density maps
Seamlessly deploy cryoSPARC in the cloud using AWS CloudFormation and AWS ParallelCluster.
Covariance Estimation and Denoising for Cryo-EM Images (Covariance Wiener Filtering)
CryoSPARC is the state-of-the-art platform used globally for obtaining 3D structural information from single particle cryo-EM data. The cryoSPARC platform enables automated, high quality and high-throughput structure discovery of proteins, viruses and molecular complexes for research and drug discovery.
cryo-ET particle picking by representation and metric learning
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