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Steinegger Lab

Steinegger Lab Github repositories

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  1. foldseek foldseek Public

    Foldseek enables fast and sensitive comparisons of large structure sets.

    C 820 101

  2. foldcomp foldcomp Public

    Compressing protein structures effectively with torsion angles

    C++ 161 14

  3. Metabuli Metabuli Public

    Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.

    C++ 118 10

  4. ufcg ufcg Public

    UFCG: Universal Fungal Core Genes

    Java 32

  5. conterminator conterminator Public

    Detection of incorrectly labeled sequences across kingdoms

    C 79 7

  6. foldmason foldmason Public

    Multiple Protein Structure Alignment at Scale with FoldMason

    C 132 13

Repositories

Showing 10 of 28 repositories
  • steineggerlab/afdb-clusters-web’s past year of commit activity
    Jupyter Notebook 2 GPL-3.0 1 1 0 Updated Nov 16, 2024
  • steineggerlab/mmseqs2-gpu-analysis’s past year of commit activity
    Shell 6 MIT 0 0 0 Updated Nov 16, 2024
  • foldseek Public

    Foldseek enables fast and sensitive comparisons of large structure sets.

    steineggerlab/foldseek’s past year of commit activity
    C 820 GPL-3.0 101 177 2 Updated Nov 14, 2024
  • bfvd-analysis Public

    Big Fantastic Virus Database (BFVD): Code used for analyses

    steineggerlab/bfvd-analysis’s past year of commit activity
    Shell 0 0 0 0 Updated Nov 13, 2024
  • foldmason Public

    Multiple Protein Structure Alignment at Scale with FoldMason

    steineggerlab/foldmason’s past year of commit activity
    C 132 GPL-3.0 13 9 0 Updated Nov 12, 2024
  • folddisco Public

    Fast indexing and search of discontinuous motifs in protein structures

    steineggerlab/folddisco’s past year of commit activity
    Rust 11 GPL-3.0 1 1 0 Updated Nov 11, 2024
  • steineggerlab/Metabuli-App’s past year of commit activity
    HTML 21 GPL-3.0 2 0 0 Updated Nov 2, 2024
  • steineggerlab/foldseek-multimer-analysis’s past year of commit activity
    Shell 1 1 0 0 Updated Oct 31, 2024
  • colabfold-protocol Public

    ColabFold protocol

    steineggerlab/colabfold-protocol’s past year of commit activity
    Jupyter Notebook 44 8 0 0 Updated Oct 17, 2024
  • ufcg Public

    UFCG: Universal Fungal Core Genes

    steineggerlab/ufcg’s past year of commit activity
    Java 32 GPL-3.0 0 16 0 Updated Oct 16, 2024