1.2.0

What's Changed

• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #301
• Update cellassign_tutorial.ipynb with numpy dummy by @ori-kron-wis in #310
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #308
• automated update for scrna/scVI_DE_worm.ipynb by @github-actions in #309
• automated update for atac/PeakVI.ipynb by @github-actions in #304
• automated update for tuning/autotune_scvi.ipynb by @github-actions in #307
• automated update for tuning/autotune_new_model.ipynb by @github-actions in #306
• automated update for atac/PoissonVI.ipynb by @github-actions in #305
• automated update for scrna/cellassign_tutorial.ipynb by @github-actions in #312
• automated update for quick_start/api_overview.ipynb by @github-actions in #311
• Changes scarches tutorial by @ori-kron-wis in #314
• Drop Python 3.9 by @ori-kron-wis in #317
• Update run_notebook.yaml by @ori-kron-wis in #318
• automated update for quick_start/api_overview.ipynb by @github-actions in #316
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #315
• automated update for quick_start/api_overview.ipynb by @github-actions in #319
• Update pyproject.toml by @ori-kron-wis in #322
• docs: updated several tutorials by @ori-kron-wis in #346
• Update several tutorials so they will work in scvi-tools 1.2.0, py312… by @ori-kron-wis in #351
• Update several tutorials so they will work in scvi-tools 1.2.0, py312… by @ori-kron-wis in #353
• automated update for atac/PeakVI.ipynb by @github-actions in #321
• automated update for atac/PoissonVI.ipynb by @github-actions in #320
• automated update for dev/data_tutorial.ipynb by @github-actions in #323
• automated update for dev/model_user_guide.ipynb by @github-actions in #324
• automated update for dev/module_user_guide.ipynb by @github-actions in #325
• automated update for hub/cellxgene_census_model.ipynb by @github-actions in #326
• automated update for hub/minification.ipynb by @github-actions in #327
• automated update for hub/scvi_hub_intro_and_download.ipynb by @github-actions in #328
• automated update for hub/scvi_hub_upload_and_large_files.ipynb by @github-actions in #329
• automated update for multimodal/cite_scrna_integration_w_totalVI.ipynb by @github-actions in #330
• automated update for multimodal/MultiVI_tutorial.ipynb by @github-actions in #331
• automated update for quick_start/api_overview.ipynb by @github-actions in #334
• automated update for scrna/amortized_lda.ipynb by @github-actions in #335
• automated update for scrna/AutoZI_tutorial.ipynb by @github-actions in #336
• automated update for scrna/contrastiveVI_tutorial.ipynb by @github-actions in #337
• automated update for scrna/query_hlca_knn.ipynb by @github-actions in #338
• automated update for scrna/scVI_DE_worm.ipynb by @github-actions in #340
• automated update for scrna/seed_labeling.ipynb by @github-actions in #341
• automated update for scrna/tabula_muris.ipynb by @github-actions in #342
• automated update for spatial/gimvi_tutorial.ipynb by @github-actions in #344
• automated update for spatial/stereoscope_heart_LV_tutorial.ipynb by @github-actions in #345
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #347
• automated update for scrna/scanvi_fix.ipynb by @github-actions in #348
• automated update for scrna/MrVI_tutorial.ipynb by @github-actions in #343
• automated update for scrna/linear_decoder.ipynb by @github-actions in #349
• automated update for tuning/autotune_scvi.ipynb by @github-actions in #354
• automated update for scrna/harmonization.ipynb by @github-actions in #352
• automated update for quick_start/data_loading.ipynb by @github-actions in #350

Full Changelog: 1.1.6...1.2.0