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    5 repositories

    • tirfm-deepfinder

      Public
      This version of DeepFinder has been customized for detecting exocytosis events in TIRF microscopy.
      Python
      •
      GNU General Public License v3.0
      •4•1•0•0•Updated Oct 31, 2024Oct 31, 2024

    • napari-exodeepfinder

      Public
      Napari plugin for ExoDeepFinder
      Python
      •
      GNU General Public License v3.0
      •0•0•0•5•Updated Oct 23, 2024Oct 23, 2024

    • cryoet-deepfinder

      Public
      Macromolecules Localization and Identification in 3D Cellular Cryo-Electron Tomograms
      Python
      •
      GNU General Public License v3.0
      •4•7•4•1•Updated Aug 5, 2024Aug 5, 2024

    • napari-deepfinder

      Public
      A napari plugin for the DeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.
      deep-learningcryo-etnapari-pluginnaparideepfinderpython
      Python
      •
      GNU General Public License v3.0
      •1•3•1•5•Updated Jul 1, 2024Jul 1, 2024

    • deep-finder

      Public
      [THIS IS CURRENTLY ONLY A FORK DEDICATED TO napari-deepinder] Deep Finder is an original deep learning approach to localize macromolecules in cryo electron tomography images. The method is based on image segmentation using a 3D convolutional neural network.
      Python
      •
      GNU General Public License v3.0
      •1•2•0•3•Updated May 6, 2023May 6, 2023