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    8 repositories

    • pecotmr

      Public
      Pair-wise enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.
      C++
      •
      Other
      •15•13•4•1•Updated Oct 16, 2024Oct 16, 2024

    • xqtl-protocol

      Public
      Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium
      fungenxqtladsp
      Jupyter Notebook
      •
      MIT License
      •42•38•70•1•Updated Oct 16, 2024Oct 16, 2024

    • xqtl-data

      Public
      Molecular QTL data resource developed by ADSP Functional Genomics Consortium
      fungenxqtladsp
      Jupyter Notebook
      •5•3•0•0•Updated Sep 6, 2024Sep 6, 2024

    • handson-tutorials

      Public
      Computer lab tutorials on statistical genetics and omics data science, contributed by various members from the community interested in developing training material for the next generation scientists
      Jupyter Notebook
      •10•6•0•0•Updated Sep 6, 2024Sep 6, 2024

    • bioworkflows

      Public
      In-house computational biology workflows at Columbia Neurology
      Jupyter Notebook
      •43•30•6•3•Updated Apr 11, 2024Apr 11, 2024

    • simxQTL

      Public
      In house simulation R package to support investigations of various QTL association methods
      R
      •
      MIT License
      •2•0•1•0•Updated Feb 26, 2024Feb 26, 2024

    • FunGenKit

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Dec 12, 2023Dec 12, 2023

    • dsc

      Public
      Repo for Dynamic Statistical Comparisons project
      Python
      •
      MIT License
      •12•1•6•0•Updated Feb 24, 2022Feb 24, 2022