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    • COMMONS Lab Public Dendron Workspace
      JavaScript
      Creative Commons Zero v1.0 Universal
      1000Updated Dec 20, 2024Dec 20, 2024
    • cfm-id

      Public
      C++
      0000Updated Dec 18, 2024Dec 18, 2024
    • Metabolic In silico Network Expansion (MINE) Database Construction and DB Logic
      Python
      MIT License
      13010Updated Nov 29, 2024Nov 29, 2024
    • Small example repo to test an other approach with cxx.rs
      Rust
      0000Updated Nov 26, 2024Nov 26, 2024
    • Python
      GNU General Public License v3.0
      0000Updated Oct 23, 2024Oct 23, 2024
    • A simple Python package to download different versions of OTT Taxonomy
      Python
      GNU General Public License v3.0
      0000Updated Oct 23, 2024Oct 23, 2024
    • A simple Python package to download different versions of NCBI Taxonomy
      Python
      0000Updated Oct 16, 2024Oct 16, 2024
    • A repo for the Epicoccum nigrum metabolomics and NP isolation paper (Azzollini)
      0000Updated Oct 5, 2024Oct 5, 2024
    • Explanation of the extraction from the lotus dataset - masterthesis by P. Amrein
      Jupyter Notebook
      Other
      0000Updated Sep 3, 2024Sep 3, 2024
    • extract and prepare (for MINEs) data from LOTUS
      HTML
      Other
      0000Updated Aug 8, 2024Aug 8, 2024
    • To process a to big dataset, it is needed to work with specific tools.
      Jupyter Notebook
      Other
      0000Updated Jul 29, 2024Jul 29, 2024
    • mzdata

      Public
      Rust
      Apache License 2.0
      5000Updated Jun 28, 2024Jun 28, 2024
    • report-template

      Public template
      A generic report template
      TeX
      GNU General Public License v3.0
      0000Updated Jun 10, 2024Jun 10, 2024
    • A .js gadget to display reaction SMIRKS and SMARTS on Wikidata
      JavaScript
      0000Updated Jun 3, 2024Jun 3, 2024
    • A script to periodically fetch git repos of interest
      Shell
      0000Updated Jun 2, 2024Jun 2, 2024
    • Python
      MIT License
      0000Updated Apr 12, 2024Apr 12, 2024
    • A Python package to proceed to the annotation of mass spectra with chemical structures
      Python
      Other
      0100Updated Mar 1, 2024Mar 1, 2024
    • matchms

      Public
      Python library for processing (tandem) mass spectrometry data and for computing spectral similarities.
      Python
      Apache License 2.0
      65000Updated Feb 26, 2024Feb 26, 2024
    • Python
      Other
      0000Updated Feb 16, 2024Feb 16, 2024
    • zen

      Public
      zen is a Python library that provides a simple and intuitive way to interact with Zenodo. With zen, you can automate and streamline various tasks related to creating, managing, and exploring Zenodo depositions, all within your Python environment.
      Python
      MIT License
      2000Updated Nov 17, 2023Nov 17, 2023
    • Serve files not hosted on the Dendron
      GNU General Public License v3.0
      1000Updated Oct 17, 2023Oct 17, 2023
    • vimms

      Public
      A framework to develop, test and optimise fragmentation strategies in LC-MS metabolomics
      Python
      MIT License
      6000Updated Oct 11, 2023Oct 11, 2023
    • A dump repo for the microcosmics project
      MIT License
      00110Updated Sep 20, 2023Sep 20, 2023
    • Jupyter Notebook
      0000Updated Aug 16, 2023Aug 16, 2023
    • Visual Studio Code SPARQL Notebook Extension
      TypeScript
      Other
      8000Updated Jun 28, 2023Jun 28, 2023
    • Coleus project Datatreatment Audrey
      GNU General Public License v3.0
      0000Updated Jun 14, 2023Jun 14, 2023
    • 🍪 A cookiecutter package for an enlightened python package
      Python
      MIT License
      7000Updated May 3, 2023May 3, 2023
    • A Python package to proceed to metabolite annotation from mass spectrometry data
      Python
      MIT License
      0000Updated Apr 22, 2023Apr 22, 2023
    • chemodiv

      Public
      R
      GNU General Public License v3.0
      0000Updated Apr 4, 2023Apr 4, 2023
    • Python
      GNU General Public License v3.0
      0000Updated Feb 16, 2023Feb 16, 2023