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Soft-mask (just for topology) 486P site 23018 #1060

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@corneliusroemer corneliusroemer commented Apr 11, 2023

  • Soft-mask 486P site 23018 to fix 22F>23A topology

Test build will be in a few hours at: https://next.nextstrain.org/staging/ncov/open/trial/486P-masked/global/1m etc.

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@corneliusroemer corneliusroemer changed the base branch from master to xbb-1-16-as-23B April 11, 2023 16:07
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rneher commented Apr 11, 2023

this doesn't seem to have made the difference we hoped for

https://next.nextstrain.org/staging/ncov/open/trial/486P-masked/global/2m?c=gt-nuc_23018&m=div

image

but I fear that at this level of convergence, we probably can't fix it via masking sites.

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At least the order 22F>23A is correct now it seems

Base automatically changed from xbb-1-16-as-23B to master April 17, 2023 20:17
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