Implementation of the Latent ODE (https://github.com/YuliaRubanova/latent_ode) for continuous glucose monitor (CGM) data.
Install required packages by running conda env create -f environment.yml. Additionally, install torchdiffeq from here.
The data set has been taken from the study by [1] and can be downloaded from the here.
[1] Heather Hall, Dalia Perelman, Alessandra Breschi, Patricia Limcaoco, Ryan Kellogg, Tracey McLaughlin, and Michael Snyder. Glucotypes reveal new patterns of glucose dysregulation. *PLoS biology*, 16(7):e2005143, 2018.