Merge pull request #661 from monarch-initiative/surgery

Surgery related issues
monarch-initiative · Jul 24, 2024 · b319646 · b319646
2 parents 53cce08 + 3952cf7
commit b319646
Showing 1 changed file with 35 additions and 1 deletion.
diff --git a/src/ontology/maxo-edit.owl b/src/ontology/maxo-edit.owl
@@ -961,6 +961,9 @@ Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0001574>))
 Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0001575>))
 Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0001576>))
 Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0001577>))
+Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0001578>))
+Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0001579>))
+Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0001580>))
 Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0009003>))
 Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0009004>))
 Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0009005>))
@@ -9905,6 +9908,7 @@ AnnotationAssertion(dce:date <http://purl.obolibrary.org/obo/MAXO_0000977> "2023
 AnnotationAssertion(dcterms:creator <http://purl.obolibrary.org/obo/MAXO_0000977> <https://orcid.org/0000-0001-7941-2961>)
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0000977> "TERPT")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0000977> "transanal endorectal pull-through procedure")
+AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/MAXO_0000977> "This is also referred to as 'Hirschsprung disease surgery' as it is used for patients with 'Hirschsprung disease'.")
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MAXO_0000977> "pull-through procedure"@en)
 SubClassOf(<http://purl.obolibrary.org/obo/MAXO_0000977> <http://purl.obolibrary.org/obo/MAXO_0001354>)
 
@@ -11179,6 +11183,36 @@ AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynony
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MAXO_0001577> "stool softener therapy")
 SubClassOf(<http://purl.obolibrary.org/obo/MAXO_0001577> <http://purl.obolibrary.org/obo/MAXO_0000267>)
 
+# Class: <http://purl.obolibrary.org/obo/MAXO_0001578> (laser surgical procedure)
+
+AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MAXO_0001578> "A surgical procedure that uses the cutting power of a laser beam to make bloodless cuts in tissue.")
+AnnotationAssertion(dce:creator <http://purl.obolibrary.org/obo/MAXO_0001578> <https://orcid.org/0000-0001-7941-2961>)
+AnnotationAssertion(dce:date <http://purl.obolibrary.org/obo/MAXO_0001578> "2024-07-24T13:53:13Z"^^xsd:dateTime)
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0001578> "laser surgery")
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0001578> "surgery performed by a laser")
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MAXO_0001578> "laser surgical procedure")
+SubClassOf(<http://purl.obolibrary.org/obo/MAXO_0001578> <http://purl.obolibrary.org/obo/MAXO_0000004>)
+
+# Class: <http://purl.obolibrary.org/obo/MAXO_0001579> (phototherapeutic keratectomy)
+
+AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "PMID:36977302") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MAXO_0001579> "A type of excimer laser eye surgery used to treat various corneal disorders by reshaping the cornea and removing superficial corneal opacities or irregularities.")
+AnnotationAssertion(dce:creator <http://purl.obolibrary.org/obo/MAXO_0001579> <https://orcid.org/0000-0001-7941-2961>)
+AnnotationAssertion(dce:date <http://purl.obolibrary.org/obo/MAXO_0001579> "2024-07-24T14:00:00Z"^^xsd:dateTime)
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0001579> "PTK")
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MAXO_0001579> "phototherapeutic keratectomy")
+SubClassOf(<http://purl.obolibrary.org/obo/MAXO_0001579> <http://purl.obolibrary.org/obo/MAXO_0000024>)
+SubClassOf(<http://purl.obolibrary.org/obo/MAXO_0001579> <http://purl.obolibrary.org/obo/MAXO_0001578>)
+
+# Class: <http://purl.obolibrary.org/obo/MAXO_0001580> (therapeutic contact lens usage)
+
+AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MAXO_0001580> "Wearing of any contact lens used to relieve pain and help protect or heal the cornea and nearby tissues.")
+AnnotationAssertion(dce:creator <http://purl.obolibrary.org/obo/MAXO_0001580> <https://orcid.org/0000-0001-7941-2961>)
+AnnotationAssertion(dce:date <http://purl.obolibrary.org/obo/MAXO_0001580> "2024-07-24T14:03:40Z"^^xsd:dateTime)
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0001580> "soft bandage contact lens usage")
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MAXO_0001580> "therapeutic contact lens usage")
+SubClassOf(<http://purl.obolibrary.org/obo/MAXO_0001580> <http://purl.obolibrary.org/obo/MAXO_0000021>)
+SubClassOf(<http://purl.obolibrary.org/obo/MAXO_0001580> <http://purl.obolibrary.org/obo/MAXO_0000305>)
+
 # Class: <http://purl.obolibrary.org/obo/MAXO_0009003> (preimplantation genetic testing)
 
 AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "NCBIBook:NBK5191") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MAXO_0009003> "Genetic testing of one or more cells removed from early embryos conceived by in vitro fertilization and transferring to the mother's uterus only those embryos determined not to have the pathogenic variant(s)/chromosome anomaly(ies) of concern.")
@@ -12592,5 +12626,5 @@ AnnotationAssertion(dcterms:creator <http://purl.obolibrary.org/obo/MAXO_0035122
 AnnotationAssertion(dce:date <http://purl.obolibrary.org/obo/MAXO_0035123> "2023-04-11T12:00:00Z")
 AnnotationAssertion(dcterms:contributor <http://purl.obolibrary.org/obo/MAXO_0035123> <https://orcid.org/0000-0002-0736-9199>)
 AnnotationAssertion(dcterms:creator <http://purl.obolibrary.org/obo/MAXO_0035123> <https://orcid.org/0000-0001-7941-2961>)
-AnnotationAssertion(<http://purl.obolibrary.org/obo/maxo#ABBREVIATION> _:genid2147483650 "")
+AnnotationAssertion(<http://purl.obolibrary.org/obo/maxo#ABBREVIATION> _:genid2147483651 "")
 )