Skip to content

Latest commit

 

History

History
40 lines (38 loc) · 3.25 KB

README.md

File metadata and controls

40 lines (38 loc) · 3.25 KB
Raw

BioHackathon Europe projects 2022

This repository is meant for the participants of the BioHackathon hosted near Paris in November 2022 to share ideas, create issues, manage projects, publish materials, create code, etc.

Projects

  • Project 1: Alignment of food and nutrition study data
  • Project 2: APICURON integration with curation databases
  • Project 3: Bioinforming
  • Project 4: BioHackrXiv
  • Project 5: Bioschemas - Enabling profile updates through the Data Discovery Engine (DE)
  • Project 6: Building a robust and reproducible assembly and annotation pipeline for non-model eukaryote genomes
  • Project 7: Connecting and visualizing FAIR data with TogoID and MetaStanza
  • Project 8: Developing a lesson for the ELIXIR Software Management Plan
  • Project 9: Disseminating FAIR Machine Learning Models via BioModels
  • Project 10: Enhance RDM in Galaxy and DSW by utilising RO-Crates
  • Project 11: Enhancement and Reusage of Biomedical Knowledge Graph Subsets
  • Project 12: Empowering the community with notebooks for bespoke microbiome analyses
  • Project 13: Exploring the landscape of the genomic wastewater surveillance ecosystem: a roadmap towards standardisation
  • Project 14: FAIR knowledge representation for user facing applications
  • Project 15: Infrastructure for Synthetic Health Data
  • Project 16: Make your own or favourite software available on your cluster with EasyBuild/EESSI
  • Project 17: Metadata schemas supporting Linked Open Science (with a focus on reproducibility)
  • Project 18: MOWL: A library for Machine Learning with Ontologies
  • Project 19: Nightingale 4.0 - Reusable web components for accelerating end-users access to tools platform metadata
  • Project 20: Onboarding suite for Federated EGA nodes
  • Project 21: Operator dashboard for controlling the NeIC Sensitive Data Archive
  • Project 22: Plant data exchange and standard interoperability
  • Project 23: Publishing and Consuming Schema.org DataFeeds
  • Project 24: Quantitative bias assessment in ELIXIR - EuropePMC biomedical publications resources
  • Project 25: Scientific and technical enhancement of bioinformatics software metadata using the Tools Ecosystem open infrastructure
  • Project 26: Shedding the light on unknown chemical substances
  • Project 27: Streamlining data brokering from RDM platforms to ELIXIR Repositories
  • Project 28: Support for the Common Workflow Language standard version 1.2 in Galaxy
  • Project 29: Supporting federated secure workflows and analysis using WfExS-backend
  • Project 30: The ELIXIR::GA4GH Cloud - Admin and User Engagement
  • Project 31: The What & How in data management: Improving connectivity between RDMkit and FAIR Cookbook
  • Project 32: Training booster: developing FAIR training materials and Learning Paths
  • Project 33: Training Systems biology curators in building interoperable and reusable models following a learning path approach
  • Project 34: Using Federated Public Data for Disease Subtyping and Prediction of Effective Treatments
  • Project 35: Workflow Execution Service to help the quality improvement of published workflows