GitHub - kerimoff/coverage_plot: This repo contains a nextflow pipeline to generate the coverage plots for QTL interpretation

kerimoff / coverage_plot Public

This repo contains a nextflow pipeline to generate the coverage plots for QTL interpretation

Name		Name	Last commit message	Last commit date
Latest commit History 38 Commits
bin		bin
conf		conf
data		data
modules		modules
workflows		workflows
.gitignore		.gitignore
Dockerfile		Dockerfile
copy_bigwigs.sh		copy_bigwigs.sh
input_test_Alasoo_2018_all_quants.tsv		input_test_Alasoo_2018_all_quants.tsv
main.nf		main.nf
make_cov_plots.sh		make_cov_plots.sh
make_plot_from_data.sh		make_plot_from_data.sh
nextflow.config		nextflow.config
plot_from_data.nf		plot_from_data.nf
submit_Alasoo_full_test.sh		submit_Alasoo_full_test.sh
submit_plot_Alasoo_complete_test.sh		submit_plot_Alasoo_complete_test.sh
submit_plot_Alasoo_exon_test.sh		submit_plot_Alasoo_exon_test.sh
submit_plot_Alasoo_ge_test.sh		submit_plot_Alasoo_ge_test.sh
submit_plot_Alasoo_leafcutter_test.sh		submit_plot_Alasoo_leafcutter_test.sh
submit_plot_Alasoo_tx_test.sh		submit_plot_Alasoo_tx_test.sh
submit_plot_Alasoo_txrev_test.sh		submit_plot_Alasoo_txrev_test.sh
submit_plot_from_data.sh		submit_plot_from_data.sh

Provide feedback