FateMapper

FateMapper is tool to analyze clone distribution, lineage similarity, and clone fate bias based on single cell lineage tracing (scLT) data.

Installation

You can install the development version of FateMapper from GitHub with:

# install.packages("devtools")
devtools::install_github("jiang-junyao/FateMapper")

Tutorial

The document and tutorial of FateMapper can be found at https://jiang-junyao.github.io/FateMapper/; The web tool version of FateMapper can be found at scLT

Citation

Jiang, J., Ye, X., Kong, Y., Guo, C., Zhang, M., Cao, F., Zhang, Y., & Pei, W. (2024). scLTdb: a comprehensive single-cell lineage tracing database. Nucleic acids research. https://doi.org/10.1093/nar/gkae913

Help

If you have any suggestions and questions, please contact [email protected]