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readme update #216

Merged
merged 8 commits into from
Oct 2, 2023
Merged

readme update #216

merged 8 commits into from
Oct 2, 2023

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UmmulkiramR
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updated readme with instructions on how to use the forked version of the nextflow library

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@justincorrigible justincorrigible left a comment

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Left a couple style suggestions.

UmmulkiramR and others added 7 commits October 2, 2023 10:28
Co-authored-by: Anders Richardsson <[email protected]>
Co-authored-by: Anders Richardsson <[email protected]>
Co-authored-by: Anders Richardsson <[email protected]>
Co-authored-by: Anders Richardsson <[email protected]>
Co-authored-by: Anders Richardsson <[email protected]>
Co-authored-by: Anders Richardsson <[email protected]>
@UmmulkiramR UmmulkiramR merged commit b3cc650 into develop Oct 2, 2023
@UmmulkiramR UmmulkiramR deleted the update_readme_for_nextflow_version branch October 2, 2023 14:40
@UmmulkiramR UmmulkiramR linked an issue Oct 2, 2023 that may be closed by this pull request
UmmulkiramR added a commit that referenced this pull request Dec 14, 2023
* upgrade springboot 2.6.6 and misc dependencies (#200)

* cannot start runs on prod #204 --  added config params to enable rabbitmq consumers to reconnect when the connection breaks.

* Develop with loggers (#208)

* Added logger statements

* Added logger statements

* research and investigation

Co-authored-by: UmmulkiramR <[email protected]>

* removed some logging (#211)

Co-authored-by: UmmulkiramR <[email protected]>

* updated nextflow version for #196 (#212)

Co-authored-by: UmmulkiramR <[email protected]>

* Nextflow 22 10 7 plugin fix (#213)

* changed nextflow library version to use the forked copy that contains the plugins fix

* changed repository name

* add github token for maven packages

---------

Co-authored-by: UmmulkiramR <[email protected]>
Co-authored-by: Anders Richardsson <[email protected]>

* readme update (#216)

* updated readme with instructions on how to use the forked version of the nextflow library

* Update README.md

Co-authored-by: Anders Richardsson <[email protected]>

* Update README.md

Co-authored-by: Anders Richardsson <[email protected]>

* Update README.md

Co-authored-by: Anders Richardsson <[email protected]>

* Update README.md

Co-authored-by: Anders Richardsson <[email protected]>

* Update README.md

Co-authored-by: Anders Richardsson <[email protected]>

* Update README.md

Co-authored-by: Anders Richardsson <[email protected]>

* added review suggestions.

---------

Co-authored-by: UmmulkiramR <[email protected]>
Co-authored-by: Anders Richardsson <[email protected]>

* Jenkins migration (#217)

* Update Jenkinsfile

* docker file update for adding server.xml for maven

---------

Co-authored-by: Yelizar Alturmessov <[email protected]>
Co-authored-by: UmmulkiramR <[email protected]>

* test command edit (#218)

Co-authored-by: UmmulkiramR <[email protected]>

* update to 3.6.0
contains:
- nextflow version change with the forked library
- Jenkins file update for cumulus build pipelines.

---------

Co-authored-by: jaserud <[email protected]>
Co-authored-by: UmmulkiramR <[email protected]>
Co-authored-by: Anders Richardsson <[email protected]>
Co-authored-by: Anders Richardsson <[email protected]>
Co-authored-by: Yelizar Alturmessov <[email protected]>
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Update nextflow version to 22.10.7
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