Version 1.3.0
Pre-release
Pre-release
What's Changed
- add latency profile and documentation to pipeline, closes #79 by @fischer-hub in #155
- Update tool versions and fix outdated DB links in processes dammit, busco by @fischer-hub in #152
- add full support for ONT-LR data in assembly sub-workflow, closes #150 by @fischer-hub in #157
- Read auto detection, closes #76 by @fischer-hub in #158
- fix pipeline crashing for long reads longer than 30k nt because of SMR, closes #162 by @fischer-hub in #164
- new parameter --rna, closes #163 by @fischer-hub in #165
- Generalize feature url retrieval in refactor_reportingtools_table.rb, closes #13 by @fischer-hub in #166
- new parameter --setup to preload all DBs and ref files, closes #102 by @fischer-hub in #161
- Skip read preprocessing (fastp), closes #100 by @fischer-hub in #160
- add busco to multiqc, closes #85 by @fischer-hub in #159
- added mamba profile by @MarieLataretu in #168
- Fc flip report by @MarieLataretu in #175
Full Changelog: 1.2.5...1.3.0