Merge pull request #131 from hesim-dev/to-cran

Prepare for CRAN submission

NEWS.md

@@ -1,3 +1,6 @@
+## hesim 0.5.5
+Minor updates to the `.Rd` files and tests to fix problem identified with the CRAN package checks.
+
 ## hesim 0.5.4
 * For individual CTSTMs, adds experimental support for `clock="mixt"` option with a `transition_types` argument for transition-specific clocks (#106).
 * Fixes several CRAN checks that were producing NOTEs related to package

cran-comments.md

@@ -1,101 +1,14 @@
 ## Release summary
-The primary purpose of this release is to fix problems identified by the 
-CRAN checks. Additional details of the release can be found at:
-https://hesim-dev.github.io/hesim/news/index.html#hesim-054
-
-This is a re-submission to fix additional NOTEs caught during the submission:
-
-```
-Flavor: r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
-Check: S3 generic/method consistency, Result: NOTE
-  Mismatches for apparent methods not registered:
-  create_StateVals:
-    function(object, ...)
-  create_StateVals.eval_model:
-    function(object, cost, name, init_args)
-
-  check:
-    function(object, ...)
-  check.params_lm:
-    function(object)
-
-  check:
-    function(object, ...)
-  check.params_surv:
-    function(object)
-
-  check:
-    function(object, ...)
-  check.eval_model:
-    function(x)
-
-  check:
-    function(object, ...)
-  check.hesim_data:
-    function(x)
-
-  check:
-    function(object, ...)
-  check.input_mats:
-    function(object)
-
-  check:
-    function(object, ...)
-  check.tparams_transprobs:
-    function(object)
-
-  check:
-    function(object, ...)
-  check.id_attributes:
-    function(object)
-
-  check:
-    function(object, ...)
-  check.params_mlogit:
-    function(object)
-
-  check:
-    function(object, ...)
-  check.eval_rng:
-    function(object)
-
-  check:
-    function(object, ...)
-  check.coeflist:
-    function(coefs)
-
-  check:
-    function(object, ...)
-  check.params_surv_list:
-    function(object)
-
-  check:
-    function(object, ...)
-  check.model_def:
-    function(x)
-
-  new_tparams_transprobs:
-    function(object, ...)
-  new_tparams_transprobs.data.table:
-    function(object)
-
-  new_tparams_transprobs:
-    function(object, ...)
-  new_tparams_transprobs.array:
-    function(object, tpmatrix_id, times, grp_id, patient_wt)
-
-  Apparent methods for exported generics not registered:
-    create_StateVals.eval_model plot_ceac.default sim_ev.NULL
-    tparams_transprobs.eval_model
-```
-
+The purpose of this release is to fix problems identified by the 
+CRAN checks. 
 
 ## Test environments
-* Local OS X, R 4.2.2
-* Ubuntu 20.04.6 (on GitHub actions), R-devel, R 4.3.2
-* Microsoft Windows Server 2022 10.0.20348 (on GitHub actions) R 4.3.2
+* Ubuntu 20.04.6 (on GitHub actions), R-devel
+* Ubuntu 20.04.6 (on GitHub actions), R-release 4.4.1
+* Microsoft Windows Server 2022 10.0.20348 (on GitHub actions) R-release 4.4.1
 * win-builder (devel, release)
-* R-hub builder
+* macOS builder
+* R-hub (atlas, gcc14, ubuntu-gcc12, linux (R-devel), macos (R-devel), macos-arm64 (R-devel), windows (R-devel))
 
 ## Win Builder R-devel results
 0 errors | 0 warnings | 0 notes