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1. hybracter hybracter Public

   Automated long-read first bacterial genome assembly tool implemented in Snakemake using Snaketool.

   Python 110 8

2. pharokka pharokka Public

   fast phage annotation program

   Python 152 16

3. phold phold Public

   Phage Annotation using Protein Structures

   Python 89 4

4. dnaapler dnaapler Public

   Reorients assembled microbial sequences

   Python 104 3

5. plassembler plassembler Public

   Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates

   Python 53 3

6. pypolca pypolca Public

   Standalone Python re-implementation of the POLCA polisher from MaSuRCA

   Python 28 1