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20 Open 32 Closed
20 Open 32 Closed
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Issues list

update to use taxtastic 0.10.0
#74 opened May 11, 2023 by nhoffman
Verify README and Wiki are up-to-date
#73 opened Feb 16, 2023 by crosenth
@crosenth
python3 support
#70 opened Apr 22, 2021 by nhoffman
@nhoffman
2
filter_outliers should retain outlier alleles if other alleles are not outliers
#69 opened Jul 31, 2019 by nhoffman
filter_outliers fails with a strange message of a missing file enhancement
#64 opened Jul 24, 2018 by ralsallaq
4
iterative filtering in filter_outliers
#63 opened Apr 9, 2018 by nhoffman
@nhoffman
add command line option for defining outlier clusters
#58 opened Jul 12, 2017 by nhoffman
externally-defined criteria for keeping/dropping records
#57 opened Jan 5, 2017 by nhoffman
@crosenth
add subcommand to dereplicate reference seqs enhancement
#54 opened Apr 22, 2016 by nhoffman
@nhoffman
pandas warning in filter_outliers
#50 opened Apr 4, 2016 by nhoffman
@crosenth
4
species annotation in filtered seq_info
#49 opened Mar 15, 2016 by nhoffman
@crosenth
filter_outliers: deduplicate sequences as part of filtering operation
#48 opened Feb 20, 2016 by nhoffman
faster fill_lonely
#37 opened Oct 12, 2015 by nhoffman
2 tasks
pep 440 versioning bug enhancement
#31 opened Aug 19, 2015 by crosenth
@crosenth
7
pairwise_distances fails for some sequence names bug
#17 opened Jan 6, 2015 by tyleraland
aligner choice in filter-outliers
#15 opened Nov 18, 2014 by nhoffman
filtering when there's a bimodal distribution of pairwise distances
#14 opened Nov 3, 2014 by nhoffman
@crosenth
search-sequences falls back to top hit if no matches above --select-threshold enhancement
#13 opened Jul 21, 2014 by crosenth
1
Support task- and process-level parallelism enhancement
#9 opened Jan 30, 2014 by cmccoy
@nhoffman
Fastphylo to calculate distance matrices for filtering?
#6 opened Dec 9, 2013 by nhoffman
4
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