Merge pull request #1085 from rl3328/main

Update the pecotmr package

container/README.md

@@ -99,7 +99,7 @@ On occasion, you may see errors that a download or upload has failed while build
 | r-bigsnpr | [Link](https://privefl.github.io/bigsnpr/) | [Link](https://anaconda.org/conda-forge/r-bigsnpr) | pecotmr | 1.12.2 | conda‑forge | GPL‑3.0‑or‑later |
 | r-fsusier | [Link](https://github.com/stephenslab/fsusier) | [Link](https://anaconda.org/dnachun/r-fsusier) | pecotmr | 0.2.0 | dnachun | GPL‑3.0‑or‑later |
 | r-mvsusier | [Link](https://github.com/stephenslab/mvsusieR) | [Link](https://anaconda.org/dnachun/r-mvsusier) | pecotmr | 0.1.7 | dnachun | GPL‑3.0‑or‑later |
-| r-pecotmr | [Link](https://github.com/cumc/pecotmr) | [Link](https://anaconda.org/dnachun/r-pecotmr) | pecotmr | 0.1.71 | dnachun | GPL‑3.0‑or‑later |
+| r-pecotmr | [Link](https://github.com/cumc/pecotmr) | [Link](https://anaconda.org/dnachun/r-pecotmr) | pecotmr | 0.1.72 | dnachun | GPL‑3.0‑or‑later |
 | r-susier | [Link](https://github.com/stephenslab/susieR) | [Link](https://anaconda.org/conda-forge/r-susier) | pecotmr, fastenloc | 0.14.7 | conda‑forge | MIT |
 | backports.zoneinfo | [Link](https://pypi.org/project/backports.zoneinfo/) | [Link](https://anaconda.org/conda-forge/backports.zoneinfo) | pecotmr, quantqtl | 0.2.1 | conda‑forge | Apache‑2.0 |
 | bioconductor-variantannotation | [Link](https://bioconductor.org/packages/release/bioc/html/VariantAnnotation.html) | [Link](https://anaconda.org/bioconda/bioconductor-variantannotation) | pecotmr, quantqtl | 1.48.1 | bioconda | Artistic‑2.0 |

container/containers.csv

@@ -73,7 +73,7 @@ trimmomatic,https://github.com/timflutre/trimmomatic,Java,0.39,N/A,bioconda,rna_
 gtex-pipeline-qtl,https://github.com/broadinstitute/gtex-pipeline/tree/master/qtl,Python,gtex_v8,bed31e12a48b25db8b111252e2136b31c64c9e82,dnachun,rna_quantification,Other,https://anaconda.org/dnachun/gtex-pipeline-qtl,
 pandas,https://pypi.org/project/pandas/,Python,1.3.5,N/A,conda-forge,"rna_quantification, tensorqtl, quantqtl",BSD-3-Clause,https://anaconda.org/conda-forge/pandas,
 r-mvsusier,https://github.com/stephenslab/mvsusieR,R,0.1.7,N/A,dnachun,pecotmr,GPL-3.0-or-later,https://anaconda.org/dnachun/r-mvsusier,
-r-pecotmr,https://github.com/cumc/pecotmr,R,0.1.71,N/A,dnachun,pecotmr,GPL-3.0-or-later,https://anaconda.org/dnachun/r-pecotmr,
+r-pecotmr,https://github.com/cumc/pecotmr,R,0.1.72,N/A,dnachun,pecotmr,GPL-3.0-or-later,https://anaconda.org/dnachun/r-pecotmr,
 r-fsusier,https://github.com/stephenslab/fsusier,R,0.2.0,dd4df3668d2ca59dd34a52b6c1b426054a998fbd,dnachun,pecotmr,GPL-3.0-or-later,https://anaconda.org/dnachun/r-fsusier,
 backports.zoneinfo,https://pypi.org/project/backports.zoneinfo/,Python,0.2.1,N/A,conda-forge,"pecotmr, quantqtl",Apache-2.0,https://anaconda.org/conda-forge/backports.zoneinfo,
 bioconductor-variantannotation,https://bioconductor.org/packages/release/bioc/html/VariantAnnotation.html,R,1.48.1,N/A,bioconda,"pecotmr, quantqtl",Artistic-2.0,https://anaconda.org/bioconda/bioconductor-variantannotation,

container/pecotmr/pecotmr.yml

@@ -16,7 +16,7 @@ dependencies:
  - r-genio=1.1.2
  - r-gwasrapidd=0.99.14
  - r-mvsusier=0.1.7
- - r-pecotmr=0.1.71
+ - r-pecotmr=0.1.72
  - r-susier=0.14.7
  - r-udr=0.3.154
  - altair

container/readme/containers.md

@@ -48,7 +48,7 @@
 | r-bigsnpr | [Link](https://privefl.github.io/bigsnpr/) | [Link](https://anaconda.org/conda-forge/r-bigsnpr) | pecotmr | 1.12.2 | conda‑forge | GPL‑3.0‑or‑later |
 | r-fsusier | [Link](https://github.com/stephenslab/fsusier) | [Link](https://anaconda.org/dnachun/r-fsusier) | pecotmr | 0.2.0 | dnachun | GPL‑3.0‑or‑later |
 | r-mvsusier | [Link](https://github.com/stephenslab/mvsusieR) | [Link](https://anaconda.org/dnachun/r-mvsusier) | pecotmr | 0.1.7 | dnachun | GPL‑3.0‑or‑later |
-| r-pecotmr | [Link](https://github.com/cumc/pecotmr) | [Link](https://anaconda.org/dnachun/r-pecotmr) | pecotmr | 0.1.71 | dnachun | GPL‑3.0‑or‑later |
+| r-pecotmr | [Link](https://github.com/cumc/pecotmr) | [Link](https://anaconda.org/dnachun/r-pecotmr) | pecotmr | 0.1.72 | dnachun | GPL‑3.0‑or‑later |
 | r-susier | [Link](https://github.com/stephenslab/susieR) | [Link](https://anaconda.org/conda-forge/r-susier) | pecotmr, fastenloc | 0.14.7 | conda‑forge | MIT |
 | backports.zoneinfo | [Link](https://pypi.org/project/backports.zoneinfo/) | [Link](https://anaconda.org/conda-forge/backports.zoneinfo) | pecotmr, quantqtl | 0.2.1 | conda‑forge | Apache‑2.0 |
 | bioconductor-variantannotation | [Link](https://bioconductor.org/packages/release/bioc/html/VariantAnnotation.html) | [Link](https://anaconda.org/bioconda/bioconductor-variantannotation) | pecotmr, quantqtl | 1.48.1 | bioconda | Artistic‑2.0 |