coloc version bump

cumc · Apr 1, 2024 · 02f1ccf · 02f1ccf
1 parent d794e79
commit 02f1ccf
Show file tree

Hide file tree

Showing 2 changed files with 3 additions and 3 deletions.
diff --git a/.github/recipe/meta.yaml b/.github/recipe/meta.yaml
@@ -24,8 +24,8 @@ requirements:
  host:
  - bioconductor-qvalue
  - r-bedtoolsr
- - r-base>=4.3
- - r-coloc>=5.2.3
+ - r-base=4.3
+ - r-coloc=5.2.3
  - r-data.table
  - r-dofuture
  - r-dplyr

diff --git a/R/file_utils.R b/R/file_utils.R
@@ -536,7 +536,7 @@ load_regional_multivariate_data <- function(matrix_y_min_complete = NULL, # when
  residual_Y_scalar = Y_scalar,
  dropped_sample = dropped_sample,
  X = X,
- maf = compute_maf(X),
+ maf = apply(X, 2, compute_maf),
  chrom = dat$chrom,
  grange = dat$grange
  ))