ccapi

A Python Library to interact with the Cell Collective API v3

ccapi is a Python Package that provides a simple interface to Cell Collective for modelling and analysis of biological networks.

Table of Contents

• Features
• Installation
• Usage
• License

Features

ccapi attempts to be an all-in-one toolbox for modelling biological systems.

• Reading public and private models from Cell Collective.
• A rich knowledge-base for each model species.
• Importing models using an SBML file format.
• Exporting models into SBML qual, Boolean Expressions, Truth Tables, Interaction Matrix and GML formats.
• Querying for models.
• Visualizing models graphically.

ccapi officially supports Python 2.7+ and 3.4+.

Installation

$ pip install https://github.com/cellcollective/ccapi.git

Documentation

Visit https://ccapi.readthedocs.org for documentation.

License

This repository has been released under the MIT License.

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