Updated imports to have Matrix version of methods and updated doc.

Former-commit-id: b39265d Former-commit-id: b9485ef
broadinstitute · Nov 8, 2018 · 2b9b616 · 2b9b616
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commit 2b9b616
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Showing 5 changed files with 12 additions and 5 deletions.
diff --git a/NAMESPACE b/NAMESPACE
@@ -37,6 +37,8 @@ import(RColorBrewer)
 import(coin)
 import(futile.logger)
 importFrom(Matrix,Matrix)
+importFrom(Matrix,colSums)
+importFrom(Matrix,rowMeans)
 importFrom(ape,as.phylo)
 importFrom(ape,write.tree)
 importFrom(binhf,ansc)

diff --git a/R/inferCNV_constants.R b/R/inferCNV_constants.R
@@ -20,7 +20,7 @@ C_OUTPUT_FORMAT <- c("pdf", "png")
 #' @importFrom ape write.tree as.phylo
 #' @importFrom fastcluster hclust
 #' @import RColorBrewer
-#' @importFrom Matrix Matrix
+#' @importFrom Matrix Matrix rowMeans colSums
 #' @import coin
 #' @importFrom dplyr %>% count
 

diff --git a/man/require_above_min_cells_ref.Rd b/man/require_above_min_cells_ref.Rd
diff --git a/man/require_above_min_mean_expr_cutoff.Rd b/man/require_above_min_mean_expr_cutoff.Rd
diff --git a/man/run.Rd b/man/run.Rd