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Update simpleaf to 0.18.0 (#52979)
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* Update simpleaf to 0.18.0

* Update build.sh

* Update meta.yaml

* Update meta.yaml

* Update meta.yaml

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Co-authored-by: Rob Patro <[email protected]>
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BiocondaBot and rob-p authored Dec 24, 2024
1 parent 57f815a commit ea9e161
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Showing 2 changed files with 11 additions and 5 deletions.
5 changes: 5 additions & 0 deletions recipes/simpleaf/build.sh
Original file line number Diff line number Diff line change
Expand Up @@ -2,6 +2,11 @@
export CFLAGS="${CFLAGS} -fcommon"
export CXXFLAGS="${CFLAGS} -fcommon"

if [ "$(uname)" == "Darwin" ]; then
export CFLAGS="${CFLAGS} -fno-define-target-os-macros"
export CXXFLAGS="${CXXFLAGS} -fno-define-target-os-macros"
fi

# Add workaround for SSH-based Git connections from Rust/cargo. See https://github.com/rust-lang/cargo/issues/2078 for details.
# We set CARGO_HOME because we don't pass on HOME to conda-build, thus rendering the default "${HOME}/.cargo" defunct.
export CARGO_NET_GIT_FETCH_WITH_CLI=true CARGO_HOME="$(pwd)/.cargo"
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11 changes: 6 additions & 5 deletions recipes/simpleaf/meta.yaml
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "0.17.4" %}
{% set version = "0.18.0" %}

package:
name: simpleaf
Expand All @@ -11,7 +11,7 @@ build:

source:
url: https://github.com/COMBINE-lab/simpleaf/archive/v{{ version }}.tar.gz
sha256: 3c14206ae0a43fe4ffaf6ccaad9c8d2636c60181bc7ec67e16c42b4d749f0070
sha256: f83a792677d7e83c16ec68143b6b6be8537d72560626a5ef2d5e26a0276a4244

requirements:
build:
Expand All @@ -22,9 +22,9 @@ requirements:
- pkg-config
host:
run:
- alevin-fry >=0.8.2
- salmon >=1.10.1
- piscem >=0.11.0 # [not osx-arm64]
- alevin-fry >=0.11.0
- salmon >=1.10.1 # [not osx]
- piscem >=0.11.0

test:
commands:
Expand All @@ -38,4 +38,5 @@ about:

extra:
additional-platforms:
- osx-arm64
- linux-aarch64

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