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Chromium_analysis #4

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Chromium_analysis #4

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Commits on Oct 13, 2024

  1. Create 00_SoupX 

    SoupX Chromium code
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    dbuszta authored Oct 13, 2024
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  2. Create 01_Merge_QC_normalization 

    new file describing steps for merging the Seurat objects, QC and normalisation
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    dbuszta authored Oct 13, 2024
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  3. Create 02_Cluster_identity_exploration 

    added file to outline how cluster identity was investigated
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    dbuszta authored Oct 13, 2024
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  4. Rename 02_Cluster_annotation to 02_Cluster_identity_explore 

    title change
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    dbuszta authored Oct 13, 2024
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  5. Create 03_Cluster_annotation 

    new files adding the first labels
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    dbuszta authored Oct 13, 2024
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  6. Create 04_Cluster_annotation_improved_with_levels 

    adding another file
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    dbuszta authored Oct 13, 2024
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  7. Update 04_Cluster_annotation_improved_with_levels

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    dbuszta authored Oct 13, 2024
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  8. Update 01_Merge_QC_normalization

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  9. Update 02_Cluster_identity_explore

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  10. Update 03_Cluster_annotation

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  11. added level2 annot

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  12. Update 04_Cluster_annotation_improved_with_levels

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  13. Create 05_Fine_annotation

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  14. Update 05_Fine_annotation

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  15. Update 05_Fine_annotation

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  16. Update 05_Fine_annotation

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  17. added more annot

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    dbuszta authored Oct 13, 2024
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  18. completed next two files

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  19. Rename 05_Fine_annotation to 05_Level3_annotation

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    dbuszta authored Oct 13, 2024
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  20. added b3 heterogeneity file

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    dbuszta authored Oct 13, 2024
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  21. a lot of changes

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    dbuszta authored Oct 13, 2024
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Commits on Oct 14, 2024

  1. final code added

    @dbuszta
    dbuszta authored Oct 14, 2024
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  2. code for umaps

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    dbuszta authored Oct 14, 2024
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