Scientific Consultant for the Center for High Performance Computing specializing in bioinformatics, R, and Nextflow.
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University of Utah CHPC
- Salt Lake City, UT
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19:26
(UTC -12:00) - https://www.linkedin.com/in/ashley-dederich-5992861b0/
Popular repositories Loading
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IGVF-Cell-Painting-Scripts
IGVF-Cell-Painting-Scripts Publicuseful scripts for cell painting data analysis
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Symbiont_genomeAssembly
Symbiont_genomeAssembly PublicMy scripts that utilize nextflow for automating and parallelizing symbiont genome assemblies.
Nextflow
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genefilter
genefilter PublicAn R script that parses through a .gbk file and returns a .csv file of the list of genes that are present
R
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blast_summaries
blast_summaries Publica few optional functions for getting the appropariate nodes from blast summaries
Python
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remove_Origin
remove_Origin Publica short bash script to remove Origin sequences from gbk files, which can clash with the R .gbk file parser, parseGenBank()
Shell
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editing_gbkFiles
editing_gbkFiles Publicto edit gbk files after pseudofinder exports .gff file
Shell
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