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Parallel read and preprocess the data #371

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@xiki-tempula xiki-tempula commented May 29, 2024

Use joblib to parallelise the read and preprocess.

@xiki-tempula xiki-tempula linked an issue May 29, 2024 that may be closed by this pull request
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codecov bot commented May 29, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 98.84%. Comparing base (584588c) to head (54bb316).

Additional details and impacted files
@@           Coverage Diff           @@
##           master     #371   +/-   ##
=======================================
  Coverage   98.83%   98.84%           
=======================================
  Files          28       28           
  Lines        1895     1899    +4     
  Branches      407      408    +1     
=======================================
+ Hits         1873     1877    +4     
  Misses          2        2           
  Partials       20       20           

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@xiki-tempula xiki-tempula marked this pull request as ready for review May 29, 2024 20:34
@xiki-tempula xiki-tempula force-pushed the 359-speed-up-the-readpreprocess-in-abfe-workflow branch from 0f9ddae to d5fe5dd Compare June 3, 2024 09:03
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Speed up the read/preprocess in ABFE workflow
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