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Achievement: StarstruckAchievement: QuickdrawAchievement: YOLOAchievement: Pull SharkAchievement: Arctic Code Vault Contributor

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@nf-core @icbi-lab

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  1. CRC_atlas_Neutro CRC_atlas_Neutro Public

    Scripts required for the DE and velocity analysis of the MUI dataset

    Jupyter Notebook 1

  2. luca luca Public

    Forked from icbi-lab/luca

    Single-cell Lung Cancer Atlas with 1.2M cells

    Python 1

  3. CRC_atlas_velocyto CRC_atlas_velocyto Public

    A nextflow pipeline to run velocyto on 10X/BD samples (CRC atlas project)

    Nextflow 1

  4. NeoFuse NeoFuse Public

    Forked from icbi-lab/NeoFuse

    NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.

    Shell

  5. nextNEOpi nextNEOpi Public

    Forked from icbi-lab/nextNEOpi

    nextNEOpi: a comprehensive pipeline for computational neoantigen prediction

    Nextflow

  6. icbi-lab/infercnvpy icbi-lab/infercnvpy Public

    Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.

    Python 137 27