Update environment.yml

YangLabHKUST · Jun 25, 2023 · c44ed2b · c44ed2b
1 parent 742d16d
commit c44ed2b
Showing 1 changed file with 10 additions and 9 deletions.
diff --git a/environment.yml b/environment.yml
@@ -1,18 +1,19 @@
 name: stitch3d
 channels:
  - conda-forge
+ - pytorch
  - bioconda
  - defaults
 dependencies:
- - python=3.7.10
- - pytorch=1.8.1
+ - python>=3.7
+ - pytorch>=1.6.0, <=1.13.1
  - scanpy=1.7.2
  - anndata=0.7.6
- - numpy=1.19.2
- - louvain=0.7.0
- - leidenalg=0.7.0
  - pandas=1.1.5
- - umap-learn=0.4.6
- - numba=0.49.1
- - pot=0.8.1.0
- - h5py=3.1.0
+ - numpy>=1.19.0
+ - louvain=0.7.0
+ - leidenalg>=0.7.0
+ - umap-learn>=0.4.6
+ - pot>=0.8.0
+ - numba>=0.49.1
+ - matplotlib<3.7