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CTAT-mutations Pipeline v2.4.0

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@brianjohnhaas brianjohnhaas released this 11 Mar 12:47
· 556 commits to master since this release

2.4.0
-added support for using single-end rna-seq reads
-support for RVBLR (our RVBoost-integration as RVB-like R)
-pctextpos is computed as an annotation and leveraged by RVBLR
-more robust variant annotation / multithreading
-annot_PASS_reads on by default now (again), but there's an option to disable if necessary.
-various bugfixes