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CTAT-Mutations v4.1.0 Release
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@brianjohnhaas brianjohnhaas released this 14 Mar 13:02
· 60 commits to master since this release
CTAT-Mutations-v4.1.0
980972a

4.1.0 March 13, 2024

  • incorporated support for single cell transcriptomics
  • more robust accounting of read support per variant type including indels and multithreading
  • include HC-realigned bam file as an output.

uses CTAT genome lib: https://data.broadinstitute.org/Trinity/CTAT_RESOURCE_LIB/__genome_libs_StarFv1.10/

Use our singularity or docker images for easy execution: https://github.com/NCIP/ctat-mutations/wiki/ctat_mutations_docker_singularity

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