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adding README for Terra wdl config
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brianjohnhaas committed Mar 25, 2024
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# WDL structure for Tera execution of CTAT_Mutations


The ctat_mutations.wdl is executed as part of the standard CTAT_Mutations pipeline execution.

For Terra, we provide pre-configured wdls to simplify access to CTAT_Mutations using provided CTAT genome libraries.



The wdl organization is outlined below:


ctat_mutations.Terra.hg19.wdl \
or ---------> ctat_mutations.Terra.wdl ---------------> ctat_mutations.wdl
ctat_mutations.Terra.hg38.wdl /


defines_config translates_config_to_native_wdl_inputs native_wdl




where ctat_mutations.Terra.hg19.wdl and ctat_mutations.Terra.hg38.wdl provide the Terra workflow interfaces.



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