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Human 1.3.0

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@haowang-bioinfo haowang-bioinfo released this 19 Dec 14:35
  • Features (PR #152):
    • feat: enable lossless Mat-Yaml model conversion toward a Yaml-based workflow
      • remove fields compOutside,rxnMiriams and metMiriams from HumanGEM model structure, and modify elements of rxnReferences and rxnConfidenceScores fields
      • importHumanYaml and testYamlConversion functions are adjusted to comply with recent model changes
  • Featurs (PR #140):
    • further integration of iHsa model into HumanGEM
      • 1605 InChI strings conflicting with metFormula are removed
      • 67 new reactions
      • 60 new metabolites
      • 688 updated KEGG reaction associations
      • 1 new gene ENSG00000183463
      • modified annotation and model changes are updated to the humanGEMRxn/MetAssoc.JSON and iHsaAdditionalIntegration_modelChanges_mets/rxns.tsv files