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Human 1.2.0
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@haowang-bioinfo haowang-bioinfo released this 25 Nov 10:08
v1.2.0
a4af9ff
  • Features (PR #147):
    • Add annotation info back to model prior to exporting SBML
  • Features (PR #131):
    • Major mass-rebalance of HumanGEM
      • 11 rxns are fixed for incorrect reversibility info (introduced by #113)
      • 4 met names are changed by replacing space with hyphen
      • 6 new mets are added
      • 21 new transport/exchange rxns are added through expanding 20 mets from existing comps to new ones
      • 465 unique mets are updated with new formula/charge
      • 729 rxn equations are updated
      • 203 duplicated rxns are removed
      • 196 rxns are blocked due to misuse of R group or pool mets
      • 10 previously inactivated reactions are reopened
      • 34 duplicated mets are merged
      • 27 unique mets are modified with updated external identifiers
      • 16 rxns are modified with updated external identifiers
      • 38 grRules are retrieved from their duplicated and removed counterparts
      • Modified annotation info and model changes are updated to the humanGEMRxn/MetAssoc.JSON and rebalance_modelChanges_mets/rxns.tsv files
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