Skip to content

Human 1.1.3

Compare
Choose a tag to compare
@haowang-bioinfo haowang-bioinfo released this 21 Oct 18:52
  • Features (PR #142):
    • Promote community input by having Gitter chat room and Contribution guidelines
  • Features (PR #141):
    • Update/reformat metabolic-task files from current and previous modeling work
  • Fixes (PR #130):
    • Resolve stoichiometric inconsistencies caused by lipid pool reactions and metabolites
      • 16 new pool metabolites (4 unique) are added
      • 6 new pool reactions (fatty acid, 1-acylglycerol-3P, and acyl-CoA) with averagely weighted components are added
      • original imbalanced cholesterol-ester pool reactions (HMR_3537 and HMR_3622) are renamed to plasma type after replacing with new pool reactions
      • 2 transport reactions are added for fatty acid and acyl-CoA pool
      • 23 unique pool metabolites are replaced with corresponding new ones among 27 lipid pool reactions
      • 12 unique pool metabolites (a total of 23) become unused and removed
      • the old pool metabolites that are still in use are renamed to liver tissue type
      • 3 protein-associated fields (proteins, prRules, rxnProtMat) are removed