Updated workflows for ubuntu and macos

.github/workflows/test_macos12.yml

@@ -0,0 +1,33 @@
+name: Integration
+on: [push, pull_request]
+jobs:
+ test:
+ runs-on: macos-12
+ steps:
+ - uses: actions/checkout@v3
+ - name: Install MacOS dependencies
+ run: |
+ brew reinstall -v gcc
+ brew install -v cmake vtk openblas lapack mesa open-mpi qt
+ brew install lcov
+ sudo ln -s /usr/local/opt/qt5/mkspecs /usr/local/mkspecs
+ sudo ln -s /usr/local/opt/qt5/plugins /usr/local/plugins
+ - name: Build svFSIplus
+ run: |
+ mkdir build
+ cd build
+ cmake -DENABLE_COVERAGE=ON -DENABLE_ARRAY_INDEX_CHECKING=ON -DENABLE_UNIT_TEST=ON ..
+ make -j2
+ - name: Install test dependencies
+ run: |
+ conda create -n svfsiplus python=3.9
+ conda run -n svfsiplus pip install pytest pytest-cov pytest-mock numpy meshio pandas
+ - name: Run integration tests
+ run: |
+ git lfs pull
+ cd tests
+ conda run -n svfsiplus pytest -rPv --durations=0
+ - name: Run unit tests
+ run: |
+ cd build/svFSI-build/Source/svFSI
+ ctest --verbose

.github/workflows/test_ubuntu20.yml

@@ -0,0 +1,25 @@
+name: Integration
+on: [push, pull_request]
+jobs:
+ test:
+ runs-on: ubuntu-20.04
+ container: msalvad/ubuntu20_vtk9:v1
+ steps:
+ - uses: actions/checkout@v3
+ - name: Build svFSIplus
+ run: |
+ mkdir build
+ cd build
+ cmake -DENABLE_COVERAGE=ON -DENABLE_ARRAY_INDEX_CHECKING=ON -DENABLE_UNIT_TEST=ON ..
+ make -j2
+ cd ..
+ - name: Run integration tests
+ run: |
+ git config --global --add safe.directory /__w/svFSIplus/svFSIplus
+ git lfs pull
+ cd tests
+ conda run -n svfsiplus pytest -rPv --durations=0
+ - name: Run unit tests
+ run: |
+ cd build/svFSI-build/Source/svFSI
+ ctest --verbose

.github/workflows/test_ubuntu22.yml

@@ -4,10 +4,6 @@ jobs:
  test:
  runs-on: ubuntu-22.04
  container: msalvad/ubuntu22_vtk9:v1
- strategy:
- matrix:
- os: [ubuntu-22.04]
- fail-fast: false
  steps:
  - uses: actions/checkout@v3
  - name: Build svFSIplus