Merge pull request #92 from MicheleNuijten/cran-update-1.4.0

Cran update 1.4.0 --> 1.5.0

.Rbuildignore

@@ -14,3 +14,4 @@ sandoval*
 todd*
 zhang*
 ^CRAN-SUBMISSION$
+^revdep$

.gitignore

@@ -4,6 +4,12 @@
 .RData
 statcheck.Rproj
 
+# files to check for reverse dependencies
+# automatically created with the revdep_check from usethis
+# these files are not necessary to share on git (and seem to create some issues
+# when syncing, so ignoring here)
+^revdep$
+
 # test materials
 # can't share because of copyright restrictions
 aloe*

DESCRIPTION

@@ -1,52 +1,58 @@
 Package: statcheck
 Title: Extract Statistics from Articles and Recompute P-Values
-Version: 1.4.1.9000
-Date: 2023-04-13
+Version: 1.5.0
+Date: 2024-02-16
 Authors@R: c(
-    person("Michele B.", "Nuijten", email = "[email protected]", 
-           role = c("aut", "cre"), comment = c(ORCID = "0000-0002-1468-8585")),
-    person("Sacha", "Epskamp", email = "[email protected]", role = "aut", 
-            comment = c(ORCID = "0000-0003-4884-8118")),
-    person("Willem", "Sleegers", role = "ctb", 
-            comment = c(ORCID = "0000-0001-9058-3817")),
+    person("Michele B.", "Nuijten", , "[email protected]", role = c("aut", "cre"),
+           comment = c(ORCID = "0000-0002-1468-8585")),
+    person("Sacha", "Epskamp", , "[email protected]", role = "aut",
+           comment = c(ORCID = "0000-0003-4884-8118")),
+    person("Willem", "Sleegers", role = "ctb",
+           comment = c(ORCID = "0000-0001-9058-3817")),
     person("Edoardo", "Costantini", role = "ctb"),
-    person("Paul", "van der Laken", role = "ctb", 
-            comment = c(ORCID = "0000-0002-0404-9114")),
-    person("Sean", "Rife", role = "ctb", 
-            comment = c(ORCID = "0000-0002-6748-0841")),
-    person("John", "Sakaluk", role = "ctb", 
-            comment = c(ORCID = "0000-0002-2515-9822")),
-    person("Chris", "Hartgerink", role = "ctb", 
-            comment = c(ORCID = "0000-0003-1050-6809")),
-    person("Steve", "Haroz", role = "ctb", 
-            comment = c(ORCID = "0000-0002-2725-9173"))
+    person("Paul", "van der Laken", role = "ctb",
+           comment = c(ORCID = "0000-0002-0404-9114")),
+    person("Sean", "Rife", role = "ctb",
+           comment = c(ORCID = "0000-0002-6748-0841")),
+    person("John", "Sakaluk", role = "ctb",
+           comment = c(ORCID = "0000-0002-2515-9822")),
+    person("Chris", "Hartgerink", role = "ctb",
+           comment = c(ORCID = "0000-0003-1050-6809")),
+    person("Steve", "Haroz", role = "ctb",
+           comment = c(ORCID = "0000-0002-2725-9173"))
   )
-Description: A "spellchecker" for statistics. It checks whether your p-values match their accompanying test statistic and 
-  degrees of freedom. statcheck searches for null-hypothesis significance test 
-  (NHST) in APA style (e.g., t(28) = 2.2, p < .05). It recalculates the p-value 
-  using the reported test statistic and degrees of freedom. If the reported and 
-  computed p-values don't match, statcheck will flag the result as an error. If
-  the reported p-value is statistically significant and the recomputed one is not,
-  or vice versa, the result will be flagged as a decision error. 
-  You can use statcheck directly on a string of text, but you can also scan a PDF 
-  or HTML file, or even a folder of PDF and/or HTML files. 
-  Statcheck needs an external program to convert PDF to text: Xpdf. Instructions
-  on where and how to download this program, how to install statcheck, and more
-  details on what statcheck can and cannot do can be found in the online manual: 
-  <https://rpubs.com/michelenuijten/statcheckmanual>. 
-  You can find a point-and-click web interface to scan PDF or HTML or DOCX 
-  articles on <http://statcheck.io>.
-Depends: R (>= 2.14.2)
+Description: A "spellchecker" for statistics. It checks whether your
+    p-values match their accompanying test statistic and degrees of
+    freedom. statcheck searches for null-hypothesis significance test
+    (NHST) in APA style (e.g., t(28) = 2.2, p < .05). It recalculates the
+    p-value using the reported test statistic and degrees of freedom. If
+    the reported and computed p-values don't match, statcheck will flag
+    the result as an error. If the reported p-value is statistically
+    significant and the recomputed one is not, or vice versa, the result
+    will be flagged as a decision error.  You can use statcheck directly
+    on a string of text, but you can also scan a PDF or HTML file, or even
+    a folder of PDF and/or HTML files.  Statcheck needs an external
+    program to convert PDF to text: Xpdf. Instructions on where and how to
+    download this program, how to install statcheck, and more details on
+    what statcheck can and cannot do can be found in the online manual:
+    <https://rpubs.com/michelenuijten/statcheckmanual>.  You can find a
+    point-and-click web interface to scan PDF or HTML or DOCX articles on
+    <http://statcheck.io>.
 License: GPL-3
+Depends: 
+    R (>= 2.14.2)
 Imports: 
-    tcltk,
-    plyr, 
-    ggplot2, 
+    ggplot2,
+    plyr,
     rlang,
-    rmarkdown
+    rmarkdown,
+    stringi,
+    tcltk
 Suggests: 
     testthat
-LazyLoad: yes
 ByteCompile: yes
 Encoding: UTF-8
-RoxygenNote: 7.2.3
+LazyLoad: yes
+RoxygenNote: 7.3.1
+URL: https://github.com/MicheleNuijten/statcheck
+BugReports: https://github.com/MicheleNuijten/statcheck/issues

NEWS.md

@@ -1,4 +1,4 @@
-# statcheck 1.4.1
+# statcheck 1.5.0
 
 ## Major changes
 
@@ -9,6 +9,7 @@
 * Recognize "narrow non-breaking spaces" in HTML files. This was an issue in articles in the Journal of Experimental Social Psychology, especially in papers published in 2019
 
 ## Bug fixes
+* Fixed some CRAN issues: explicitly import the package stringi and fix package alias.
 
 # statcheck 1.4.0
 <!---searched in commits on statcheck repo: `committer-date:2020-03-15..2020-04-30`

R/statcheck-package.R

@@ -79,7 +79,7 @@
 #' https://psyarxiv.com/tcxaj/.}
 
 #' @keywords internal
-#' @aliases {statcheck}-package
+#' @aliases statcheck-package
 "_PACKAGE"
 
 #' @name statcheck

README.md

@@ -8,7 +8,7 @@
 
 [![](https://www.r-pkg.org/badges/version/statcheck?color=green)](https://cran.r-project.org/package=statcheck)
 [![](http://cranlogs.r-pkg.org/badges/grand-total/statcheck?color=green)](https://cran.r-project.org/package=statcheck)
-[![](https://img.shields.io/badge/devel%20version-1.4.0-yellow.svg)](https://github.com/MicheleNuijten/statcheck)
+[![](https://img.shields.io/badge/devel%20version-1.5.0-yellow.svg)](https://github.com/MicheleNuijten/statcheck)
 <!-- badges: end -->
 
 ## What is statcheck?
@@ -39,10 +39,10 @@ result as an error.
 3.  **Research**: `statcheck` can be used to automatically extract
     statistical test results from articles that can then be analyzed.
     You can for instance investigate whether you can predict statistical
-    inconsistencies (see e.g., [Nuijten et al.,
-    2017](https://doi.org/10.1525/collabra.102)), or use it to analyze
-    p-value distributions (see e.g., [Hartgerink et al.,
-    2016](https://peerj.com/articles/1935/)).
+    inconsistencies (see e.g., Nuijten et al., 2017
+    <doi:10.1525/collabra.102>), or use it to analyze p-value
+    distributions (see e.g., Hartgerink et al., 2016
+    <doi:10.7717/peerj.1935>).
 
 ## How does statcheck work?
 
@@ -58,9 +58,9 @@ The algorithm behind `statcheck` consists of four basic steps:
     degrees of freedom.
 4.  **Compare** the reported and recomputed *p*-value. If the reported
     *p*-value does not match the computed one, the result is marked as
-    an *inconsistency* (`Error` in the output). If the reported
+    an *inconsistency* (`error` in the output). If the reported
     *p*-value is significant and the computed is not, or vice versa, the
-    result is marked as a *gross inconsistency* (`DecisionError` in the
+    result is marked as a *gross inconsistency* (`decision_error` in the
     output).
 
 `statcheck` takes into account correct rounding of the test statistic,
@@ -72,5 +72,5 @@ and has the option to take into account one-tailed testing. See the
 For detailed information about installing and using `statcheck`, see the
 [manual on RPubs](http://rpubs.com/michelenuijten/statcheckmanual).
 
-[statcheck.io](http://statcheck.io/) is a web-based interface for
+Also see [statcheck.io](http://statcheck.io/), a web-based interface for
 statcheck.

cran-comments.md

@@ -1,16 +1,5 @@
 ## R CMD check results
-There were no ERRORs or WARNINGs. 
-
-There was one NOTE listing some possibly misspelled words in DESCRIPTION:
-  APA (26:13)
-  DOCX (37:71)
-  NHST (26:4)
-  Statcheck (33:3)
-  Xpdf (33:63)
-  statcheck (25:23, 28:34, 31:15, 34:61, 35:19)
-
-These are all either names of software (statcheck; Xpdf) or common abbreviations
-in the field of psychology that this package is intended for.
+There were no ERRORs or WARNINGs or NOTEs.
 
 ## Downstream dependencies
 There are currently no downstream dependencies for this package.