GitHub - Kafri-Lab/Cell-Image-Analysis: Segment and measure single cells in fluorescence and phase contrast microscopy

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Segment and measure single cells in fluorescence and phase contrast microscopy

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Name		Name	Last commit message	Last commit date
Latest commit History 46 Commits
ResultTable_Analysis_Pipeline		ResultTable_Analysis_Pipeline
$matlab_temp_file$1eac		$matlab_temp_file$1eac
$matlab_temp_file$2948		$matlab_temp_file$2948
.gitignore		.gitignore
Camilla_ImageProcessingCommands.m		Camilla_ImageProcessingCommands.m
Camilla_ImageProcessingCommands2.m		Camilla_ImageProcessingCommands2.m
Choose_Seeds.m		Choose_Seeds.m
Chris_To_Do_List.m		Chris_To_Do_List.m
Collecting_Histogram_Data.m		Collecting_Histogram_Data.m
Collecting_Lkb_Data.m		Collecting_Lkb_Data.m
Collecting_MoreRegionProps.m		Collecting_MoreRegionProps.m
Collecting_Morphological_Data.m		Collecting_Morphological_Data.m
Collecting_prctile_data.m		Collecting_prctile_data.m
DanielS_ImageProcessingCommands.m		DanielS_ImageProcessingCommands.m
Eden_ImageProcessingCommands.m		Eden_ImageProcessingCommands.m
FigureSaver.m		FigureSaver.m
Finding_Dividing_Cells_Based_On_Gem_Histone.m		Finding_Dividing_Cells_Based_On_Gem_Histone.m
HeatherD_ImageProcessingCommands .m		HeatherD_ImageProcessingCommands .m
Justin_Segmentation_List.m		Justin_Segmentation_List.m
Lior_ImageProcessingCommands.m		Lior_ImageProcessingCommands.m
MySavedPlot.eps		MySavedPlot.eps
O_GUI_6.m		O_GUI_6.m
O_GUI_6_beta.m		O_GUI_6_beta.m
O_Get_Image_File.m		O_Get_Image_File.m
O_LoadImages.m		O_LoadImages.m
O_LoadImages_Shixuan_BG.m		O_LoadImages_Shixuan_BG.m
O_NormalizeImages.m		O_NormalizeImages.m
O_SegmentCells_v6.m		O_SegmentCells_v6.m
O_SegmentCells_v6_Par_proc.m		O_SegmentCells_v6_Par_proc.m
O_SegmentCells_v6_Par_proc_Shixuan_BG.m		O_SegmentCells_v6_Par_proc_Shixuan_BG.m
O_SegmentCells_v6_SingleImage.m		O_SegmentCells_v6_SingleImage.m
O_SegmentCells_v6_SingleImage_BackupCopy7Apr2017.m		O_SegmentCells_v6_SingleImage_BackupCopy7Apr2017.m
O_SegmentCells_v6_SingleImage_Shixuan_BG.m		O_SegmentCells_v6_SingleImage_Shixuan_BG.m
O_SpotCells.m		O_SpotCells.m
O_SpotCells_BWDIST.m		O_SpotCells_BWDIST.m
O_SpotCells_DAPI_BWDIST.m		O_SpotCells_DAPI_BWDIST.m
O_SpotCells_Daniel_1.m		O_SpotCells_Daniel_1.m
O_SpotCells_Daniel_2.m		O_SpotCells_Daniel_2.m
O_WaterShedCells.m		O_WaterShedCells.m
O_retrieve_names_v2.m		O_retrieve_names_v2.m
Saving_Boundries.m		Saving_Boundries.m
Show_Selected_Cell.m		Show_Selected_Cell.m
To_do_list.m		To_do_list.m
To_do_list_Annie.m		To_do_list_Annie.m
To_do_list_DanielH_v6.m		To_do_list_DanielH_v6.m
To_do_list_Heather.m		To_do_list_Heather.m
To_do_list_Heather_2.m		To_do_list_Heather_2.m
To_do_list_Jane_v6.m		To_do_list_Jane_v6.m
To_do_list_Lior.m		To_do_list_Lior.m
To_do_list_Miriam.m		To_do_list_Miriam.m
To_do_list_Miriam_SelectSpecificWellsToSegment.m		To_do_list_Miriam_SelectSpecificWellsToSegment.m
To_do_list_Nancy.m		To_do_list_Nancy.m
To_do_list_Nancy_0929.m		To_do_list_Nancy_0929.m
To_do_list_Nancy_v6.m		To_do_list_Nancy_v6.m
To_do_list_Rajesh.m		To_do_list_Rajesh.m
Untitled.m		Untitled.m
Untitled4.m		Untitled4.m
analysisPlot_sameGemThr_MAD.m		analysisPlot_sameGemThr_MAD.m
imoverlay.m		imoverlay.m
normalize0to1.m		normalize0to1.m
parfor_progress.m		parfor_progress.m
scatterPlots.m		scatterPlots.m
showseg_thick.m		showseg_thick.m
text2im.m		text2im.m
xml2struct.m		xml2struct.m