Merge pull request #9 from JuliaAstro/mg/ci

Switch CI to GitHub Actions

.github/workflows/CompatHelper.yml

@@ -0,0 +1,31 @@
+name: CompatHelper
+on:
+  schedule:
+    - cron: 59 14 * * *
+  workflow_dispatch:
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    steps:
+      - name: "Add the General registry via Git"
+        run: |
+          import Pkg
+          ENV["JULIA_PKG_SERVER"] = ""
+          Pkg.Registry.add("General")
+        shell: julia --color=yes {0}
+      - name: "Install CompatHelper"
+        run: |
+          import Pkg
+          name = "CompatHelper"
+          uuid = "aa819f21-2bde-4658-8897-bab36330d9b7"
+          version = "3"
+          Pkg.add(; name, uuid, version)
+        shell: julia --color=yes {0}
+      - name: "Run CompatHelper"
+        run: |
+          import CompatHelper
+          CompatHelper.main()
+        shell: julia --color=yes {0}
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+          COMPATHELPER_PRIV: ${{ secrets.DOCUMENTER_KEY }}

.github/workflows/TagBot.yml

@@ -1,11 +1,18 @@
 name: TagBot
 on:
-  schedule:
-    - cron: 0 * * * *
+  issue_comment:
+    types:
+      - created
+  workflow_dispatch:
+    inputs:
+      lookback:
+        default: 3
 jobs:
   TagBot:
+    if: github.event_name == 'workflow_dispatch' || github.actor == 'JuliaTagBot'
     runs-on: ubuntu-latest
     steps:
       - uses: JuliaRegistries/TagBot@v1
         with:
           token: ${{ secrets.GITHUB_TOKEN }}
+          ssh: ${{ secrets.DOCUMENTER_KEY }}

.github/workflows/ci.yml

@@ -0,0 +1,41 @@
+name: CI
+
+on:
+  push:
+    branches: "master"
+    tags: ["*"]
+  pull_request:
+  release:
+
+jobs:
+  test:
+    name: Julia ${{ matrix.julia-version }} - ${{ matrix.os }} - ${{ matrix.julia-arch }}
+    runs-on: ${{ matrix.os }}
+    strategy:
+      fail-fast: false
+      matrix:
+        julia-version:
+          - "1.6"
+          - "1"
+          - "nightly"
+        os:
+          - ubuntu-latest
+          ## macOS and Windows faile because of
+          ## https://github.com/cjdoris/PythonCall.jl/issues/165
+          # - macos-latest
+          # - windows-latest
+        julia-arch:
+          - x64
+    steps:
+      - uses: actions/checkout@v3
+      - uses: julia-actions/setup-julia@v1
+        with:
+          version: ${{ matrix.julia-version }}
+          arch: ${{ matrix.julia-arch }}
+      - uses: julia-actions/cache@v1
+      - uses: julia-actions/julia-buildpkg@latest
+      - uses: julia-actions/julia-runtest@latest
+      - uses: julia-actions/[email protected]
+        continue-on-error: true
+      - uses: julia-actions/[email protected]
+        continue-on-error: true

CondaPkg.toml

@@ -0,0 +1,6 @@
+channels = ["astropy", "conda-forge"]
+
+[deps]
+python = "=3.7"
+astropy = "=4.3"
+reproject = "=0.5"

Project.toml

@@ -1,7 +1,7 @@
 name = "Reproject"
 uuid = "d1dcc2e6-806e-11e9-2897-3f99785db2ae"
 authors = ["Mosè Giordano", "Rohit Kumar"]
-version = "0.3.0"
+version = "0.3.1"
 
 [deps]
 FITSIO = "525bcba6-941b-5504-bd06-fd0dc1a4d2eb"
@@ -10,13 +10,8 @@ SkyCoords = "fc659fc5-75a3-5475-a2ea-3da92c065361"
 WCS = "15f3aee2-9e10-537f-b834-a6fb8bdb944d"
 
 [compat]
-julia = "^1.0.0"
-
-[extras]
-Conda = "8f4d0f93-b110-5947-807f-2305c1781a2d"
-PyCall = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0"
-SHA = "ea8e919c-243c-51af-8825-aaa63cd721ce"
-Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
-
-[targets]
-test = ["Conda", "PyCall", "SHA", "Test"]
+FITSIO = "0.15, 0.16"
+Interpolations = "0.13"
+SkyCoords = "0.4, 1"
+WCS = "0.5, 0.6"
+julia = "1.6"

README.md

@@ -1,9 +1,8 @@
 # Reproject
 
-[![Build Status](https://travis-ci.com/JuliaAstro/Reproject.jl.svg?branch=master)](https://travis-ci.com/JuliaAstro/Reproject.jl)
+[![CI](https://github.com/JuliaAstro/Reproject.jl/actions/workflows/ci.yml/badge.svg)](https://github.com/JuliaAstro/Reproject.jl/actions/workflows/ci.yml)
 [![Coveralls](https://coveralls.io/repos/github/JuliaAstro/Reproject.jl/badge.svg?branch=master)](https://coveralls.io/github/JuliaAstro/Reproject.jl?branch=master)
 [![GitHub release](https://img.shields.io/github/release/JuliaAstro/Reproject.jl.svg)](https://github.com/JuliaAstro/Reproject.jl/releases/)
-[![HitCount](http://hits.dwyl.io/JuliaAstro/Reproject.jl.svg)](http://hits.dwyl.io/JuliaAstro/Reproject.jl)
 
 Implementation in [Julia](https://julialang.org/) of the
 [`reproject`](https://github.com/astropy/reproject) package by Thomas

test/Project.toml

@@ -0,0 +1,12 @@
+[deps]
+FITSIO = "525bcba6-941b-5504-bd06-fd0dc1a4d2eb"
+PythonCall = "6099a3de-0909-46bc-b1f4-468b9a2dfc0d"
+SHA = "ea8e919c-243c-51af-8825-aaa63cd721ce"
+Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
+WCS = "15f3aee2-9e10-537f-b834-a6fb8bdb944d"
+
+[compat]
+FITSIO = "0.15, 0.16"
+PythonCall = "0.8"
+WCS = "0.5, 0.6"
+julia = "1.6"

test/core.jl

@@ -14,23 +14,26 @@ function download_dep(orig, dest, hash)
 end
 
 @testset "reproject-core" begin
-    download_dep("https://astropy.stsci.edu/data/galactic_center/gc_2mass_k.fits", "gc_2mass_k.fits",
+    download_dep("https://www.astropy.org/astropy-data/galactic_center/gc_2mass_k.fits", "gc_2mass_k.fits",
                  "763ef344df3ac8fa80ff46f00ca1ec59946ca3f99502562d6fcfb73320b1cec3")
-    download_dep("https://astropy.stsci.edu/data/galactic_center/gc_msx_e.fits", "gc_msx_e.fits",
+    download_dep("https://www.astropy.org/astropy-data/galactic_center/gc_msx_e.fits", "gc_msx_e.fits",
                  "3687fb3763911825f981e74b6a9b82c0e618f7e592b1e0cb17e2c63164e28cd6")
 
-    imgin = FITS(joinpath("data", "gc_msx_e.fits"))    # project this
-    imgout = FITS(joinpath("data", "gc_2mass_k.fits")) # into this coordinate
+    gc_msx_e = joinpath(@__DIR__, "data", "gc_msx_e.fits")
+    gc_2mass_k = joinpath(@__DIR__, "data", "gc_2mass_k.fits")
 
-    hdu1 = astropy.io.fits.open(joinpath("data", "gc_2mass_k.fits"))[1]
-    hdu2 = astropy.io.fits.open(joinpath("data", "gc_msx_e.fits"))[1]
+    imgin = FITS(gc_msx_e)    # project this
+    imgout = FITS(gc_2mass_k) # into this coordinate
 
-    @test isapprox(reproject(imgin, imgout, order = 0)[1]', rp.reproject_interp(hdu2, hdu1.header, order = 0)[1], nans = true, rtol = 1e-7)
-    @test isapprox(reproject(imgout, imgin, order = 0)[1]', rp.reproject_interp(hdu1, hdu2.header, order = 0)[1], nans = true, rtol = 1e-6)
-    @test isapprox(reproject(imgin, imgout, order = 1)[1]', rp.reproject_interp(hdu2, hdu1.header, order = 1)[1], nans = true, rtol = 1e-7)
-    @test isapprox(reproject(imgin, imgout, order = 2)[1]', rp.reproject_interp(hdu2, hdu1.header, order = 2)[1], nans = true, rtol = 6e-2)
+    hdu1 = astropy.io.fits.open(gc_2mass_k)[0]
+    hdu2 = astropy.io.fits.open(gc_msx_e)[0]
+
+    @test isapprox(reproject(imgin, imgout, order = 0)[1]', pyconvert(Matrix, rp.reproject_interp(hdu2, hdu1.header, order = 0)[0]), nans = true, rtol = 1e-7)
+    @test isapprox(reproject(imgout, imgin, order = 0)[1]', pyconvert(Matrix, rp.reproject_interp(hdu1, hdu2.header, order = 0)[0]), nans = true, rtol = 1e-6)
+    @test isapprox(reproject(imgin, imgout, order = 1)[1]', pyconvert(Matrix, rp.reproject_interp(hdu2, hdu1.header, order = 1)[0]), nans = true, rtol = 1e-7)
+    @test isapprox(reproject(imgin, imgout, order = 2)[1]', pyconvert(Matrix, rp.reproject_interp(hdu2, hdu1.header, order = 2)[0]), nans = true, rtol = 6e-2)
     @test isapprox(reproject(imgin[1], imgout[1], shape_out = (1000,1000))[1]',
-            rp.reproject_interp(hdu2, astropy.wcs.WCS(hdu1.header), shape_out = (1000,1000))[1], nans = true, rtol = 1e-7)
+                   pyconvert(Matrix, rp.reproject_interp(hdu2, astropy.wcs.WCS(hdu1.header), shape_out = (1000,1000))[0]), nans = true, rtol = 1e-7)
 
     wcs = WCSTransform(2; ctype = ["RA---AIR", "DEC--AIR"], radesys = "UNK")
     @test_throws ArgumentError reproject(imgin, wcs, shape_out = (100,100))

test/runtests.jl

@@ -1,12 +1,9 @@
 using Reproject
 using Test
-using Conda, PyCall
+using PythonCall
 using FITSIO, WCS
 using SHA: sha256
 
-ENV["PYTHON"]=""
-Conda.add_channel("astropy")
-Conda.add("reproject")
 rp = pyimport("reproject")
 astropy = pyimport("astropy")